Serratia surfactantfaciens: ATE40_022865
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Entry
ATE40_022865 CDS
T06779
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssur03016
]
ATE40_022865
Enzymes [BR:
ssur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ATE40_022865
Transfer RNA biogenesis [BR:
ssur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATE40_022865
Prokaryotic type
ATE40_022865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AOF01942
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All DBs
Position
4898959..4899903
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQIVQERPVNFTQAQLDAALDTFRGDIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPIARMVTLEQLNALLAQAQEQAIAPGELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRITEGEERKFIGVGDIAED
GRVAPRRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgatatccacggcgtgctgttgctggacaagccg
cagggtttgtcgtccaacgatgcgctgcaaaaagtaaagcgcctgtacaacgccaaccgg
gcgggtcacaccggcgcgctcgatccgctggcgaccggcatgttgcctatctgcctgggt
gaagcgaccaagttttcgcaatatctgctcgattccgacaagcgctatcgggtgatcgcc
aagctggggcagcgtaccgatacctcggacgccgacggtcagatcgtgcaggagcgcccg
gtgaacttcacccaggcgcagctcgacgcggcgctggacaccttccgcggcgacatccag
caggtgccgtcgatgtattcggcgctgaaataccagggcaagaaactctacgagtatgcg
cgccaggggattgaagtgccgcgcgaagcgcgcagcatcacggtgtacgagctgcagttt
atccgctgggaaggggatgagctggagctggagatccactgctcgaaaggcacttacatc
cgcaccatcaccgacgatctcggcgagctgctgggctgcggcgcgcacgtgatctatctg
cgtcgcctgcaggtggcgacttacccgatcgcgcgcatggtgacgctggaacagctgaac
gccttgctggcgcaggcgcaggaacaagcgatcgcccccggcgagctgctcgatccgctg
ctgatgccgatggacagcccggttgagaactatccggaagtgaatttgctgccggtggtg
gcgggctacgtcaagcaggggcagccggtgcaggtggccggtgcgccggcctccggtatg
gtgcgtatcaccgagggtgaagagcggaaattcatcggcgttggcgacatcgccgaggat
ggtcgcgtggcgccgcgccgcctggtggtcgaacatttcgactga
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