Serratia surfactantfaciens: ATE40_022950
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Entry
ATE40_022950 CDS
T06779
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur00330
Arginine and proline metabolism
ssur00480
Glutathione metabolism
ssur01100
Metabolic pathways
ssur01110
Biosynthesis of secondary metabolites
ssur04148
Efferocytosis
Module
ssur_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ATE40_022950
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ATE40_022950
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ATE40_022950
Enzymes [BR:
ssur01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ATE40_022950
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Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AOF01957
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Position
complement(4917664..4919826)
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AA seq
720 aa
AA seq
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MKNLKIAANTQTLGCFETERDIVDVHHSDFNDVAAIVLSVDDVAQGMVARIEEHGLNIPL
FVAVCCEEELDNAVLPALHGVFELCGKNTQFYGKQLEAAAAKYESELLPPFFNTLTQYVE
MGNATFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGAPCAAQ
QHAAKVFNADKTYFVLNGTSASNKVATNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFDERYLRQQIREVAPERANEARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQSRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRL
WQECVRVGIEARKMLLDTCTMIKPFVPDQIDGKPWQAYDTVAMANDLRFFNFVPGEKWHA
FEGYAESQYFVDPCKLLLTTPGIDTATGSYSEFGIPATILANYLRENGIVPEKCDLNSIL
FLLTPAEDIAKMQHLVALIARFEKHIEQNSLLSEVLPAVYKNHQQRYKNYTIRQLCQEMH
DLYVSYDVKELQKEMFRKSYFPRVVMNPQDANTEFVRGNVELVSLAKAEGRIAAEGALPY
PPGVLCVVPGEIWGGAAQRYFLALEEGINLLPGFAPELQGVYIQQDEDGWNRAYGYVMKN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttaaaaattgccgccaacacccaaaccctcggctgctttgaaactgaacgc
gacatcgtcgatgtgcatcacagcgatttcaatgacgtcgccgccatcgtgctgtcggta
gacgacgtcgcgcaaggcatggtggcgcgcatcgaagaacacggcctgaacatcccgctg
ttcgtcgccgtctgctgcgaagaagagctggataacgccgtcttgccggcgctgcacggc
gtgtttgaactgtgcggcaagaatacccagttctacggcaaacagctggaggccgccgcc
gccaaatatgagagcgagctgctgccgccgttcttcaacacgctgacgcagtacgtggaa
atgggcaacgccaccttcgcctgccccggccaccagggcggcgagttcttccgcaaacac
ccggcgggccgccagttcttcgacttctacggcgaaacgcttttccgctccgacatgtgc
aacgccgacgtcaaactgggcgacctattgatccacgaaggcgcaccttgcgccgcgcag
caacacgccgccaaggtgttcaacgccgacaagacctacttcgtgctcaacggcacctcg
gcctcgaacaaggtggcgaccaacgccctgctgacgcgcggcgacctggtgctgttcgac
cgcaacaaccataaatccaaccaccacggcgcgttgatccaggccggtgctacgccggta
tatctggaaaccgcccgtaacccgttcggctttatcggcggcatcgacgcgcactgtttc
gacgaacgctacctgcgccagcagatccgcgaagtggcgccggaacgcgccaacgaggct
cgcccgttccgcctggcgatcatccagcttggcacctacgacggcaccatctacaacgcc
cgtcaggtggtcgacaagattggccatctttgcgactacatcctgttcgactccgcctgg
gtgggctatgagcagttcattccgatgatgaaagactgctcgccgctgctgctggagctg
aacgaaaacgatcccggcatcatcgtcacccagtcggtgcacaaacagcaggccggtttc
tcgcagacctcgcagatccacaaaaaagacaagcatatcaaggggcagagccgctactgc
aaccacaagcgcttcaacaacgcctttatgctgcacgcctccaccagcccgttctacccg
ctgttcgccgcgctggacgtcaacgccaagatgcacgagggcaaaagcggccagcgcctg
tggcaggagtgcgtgcgcgtgggcatcgaagcgcgcaaaatgctgctggatacctgcacg
atgatcaaaccgttcgtgccggatcagatcgacggcaagccgtggcaggcctatgacacc
gtggcgatggccaacgatctgcgcttcttcaacttcgtgcccggcgagaaatggcacgcc
tttgaaggctatgccgaatcgcagtatttcgtcgatccgtgcaaactgctgctcaccacg
ccgggcatcgataccgcgaccggcagctacagcgagttcggcatcccggcgaccattctg
gccaactacctgcgcgaaaacggcatcgtgccggaaaaatgcgatctcaactcgatcctg
ttcctgctgacgccggcggaagacatcgccaagatgcagcacctggtggccctgatcgcc
cgcttcgagaaacacatcgagcaaaactccctgctcagcgaggtgctgcctgcggtctat
aaaaaccaccagcagcgctacaaaaactacaccatccgccagctgtgccaggaaatgcac
gacctttacgtcagctacgacgttaaagaactgcaaaaagagatgttccgcaaaagctat
ttcccacgcgtggtgatgaacccgcaggacgccaataccgagttcgtgcgcggcaatgtg
gaattggtgtcgctggccaaggccgagggccgcatcgccgccgaaggcgccctgccttac
ccaccaggcgtgctgtgcgtggtgcctggtgaaatttggggcggcgccgctcagcgttat
ttcctggcactggaagaaggcatcaacttattgccgggattcgcaccggaattgcagggc
gtttatatccaacaggatgaggacggctggaaccgcgcttacggctacgtcatgaaaaat
taa
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