Serratia surfactantfaciens: ATE40_023500
Help
Entry
ATE40_023500 CDS
T06779
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssur03000
]
ATE40_023500
Transcription factors [BR:
ssur03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ATE40_023500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_11
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AOF02059
LinkDB
All DBs
Position
5033625..5034554
Genome browser
AA seq
309 aa
AA seq
DB search
MQVKKRALLGQLSDMDLRLLRVFKAVVDCGGMSAAELELNISLSTISKHIKDLEQRLGLT
LCQRGREGFAVTDEGLLIYQETVNLLAATEAFRRGVDEVHQRMGGQLHVAIFDHTVSNPQ
AQIGRAIALFSERAPEVSLQMYVEPINTIERGVIDGQFQVGVIPMHRSAESLSYHSLFSE
RMFLYCGAQHELFSARHETLNWDLLHNYAFAGLGYHSPNMELSLQQHLHRKATGFAQESI
ATLILSGKYVGFLPDHYAAFFVAQNLMRAIKPALFRYHCEYSCVLRRSPVPQRVVKLFHE
CLLAAHGTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaaaagcgcgcgttgttagggcaattgtcggatatggatctgcgtttgctg
cgggtattcaaggccgtggtcgactgtggcggcatgagcgccgccgaactggagctgaac
atcagcctgtcgaccatcagcaagcacatcaaggatctggagcagcggctgggcttgacg
ctgtgccagcgcgggcgcgagggctttgcggtcaccgacgaggggctgttgatctaccag
gaaacggtcaacctgctggcggccaccgaggccttccggcgcggggtggacgaggtgcat
cagcgcatgggcgggcagctgcacgtggcgatattcgaccatacggtcagtaatccgcag
gcgcagatcggccgggccatcgcgttattcagcgagcgcgcgccggaggtttctttgcaa
atgtatgtggagccgattaataccattgaacgcggcgttattgacgggcaatttcaggtt
ggggttattcccatgcaccgcagcgcagaaagtttatcttatcattcgttattcagtgag
aggatgttcttatattgcggcgcgcagcatgaattattttccgcccgtcatgaaacatta
aattgggatctgctgcacaattatgccttcgccggattaggctatcattcgccgaatatg
gaactgagcctgcagcaacatttgcatcgcaaggcgacgggatttgcgcaggaatcgata
gcgacgttaattctgtccggcaaatacgtcggctttttgcccgatcactacgcggcgttt
tttgtggcgcagaacctgatgcgggcgatcaaaccggcgctgttccgctatcactgcgaa
tactcctgcgtgctgcgccgctcgccggtaccgcagcgggtggtgaagctgttccatgag
tgcctgctggcggcccacggaacagcgtga
DBGET
integrated database retrieval system
