Streptococcus suis SC070731 (serotype 2): NJAUSS_0389
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Entry
NJAUSS_0389 CDS
T02536
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssus
Streptococcus suis SC070731 (serotype 2)
Pathway
ssus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NJAUSS_0389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssus03019
]
NJAUSS_0389
Messenger RNA biogenesis [BR:
ssus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NJAUSS_0389
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
DivIVA
KH_NusA_2nd
ATP-synt_B
KH_KhpA-B
dUTPase
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
AGG63876
LinkDB
All DBs
Position
404370..405983
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AA seq
537 aa
AA seq
DB search
MNIITVVVTLVSALIGLVLGYFAISLKMKSAKETAELTLLNAEQEASNVRGRAEEQAEVI
LKTAERDRQTLKKELLLEAKEEARKYREEIAEEFKSERQELKQIESRLTERATSLDRKDD
NLTNKEKTLEQKEQSLTDKAKHIDEREQEVVKLEEQKALELERVAALSQEEAKEIILTDT
RDKLTHEIATRIKEAEREVKERSDKMAKDLLAQAMQRISGEYVAEQTITSVHLPDDAMKG
RIIGREGRNIRTFESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTMETLLQDGRIHPAR
IEELVEKHRVEMDNRIREYGEAAAYEVGAPNLHPDLIKIMGRLHFRTSYGQNVLRHSIEV
AKLAGVLAAELGENVNLARRAGFLHDVGKAIDREVDGSHVEIGTELAKKYKENPIVINAI
ASHHGDVEATSTIAVIVAAADALSAARPGSRRESMEAYIKRLQDLEEIANSFEGIKQSYA
IQAGREIRIIVHPNKVTDDQITILAHDVREKIENNLDYPGNIKITVIRETRATDVAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattacagtagtagtgacacttgtttctgctctcattggtttagtattaggt
tactttgccatttctttgaagatgaaatctgcaaaagaaactgcagaattgacactttta
aacgcagaacaagaagctagtaatgttcgtggtcgagcagaagagcaagctgaggttatt
ctaaaaacagctgagcgcgatcgccagaccttgaaaaaagaattactcttggaagctaag
gaagaagctcgtaagtaccgagaagaaattgcagaagaatttaagtcagaacgtcaagag
ttgaagcaaatcgaatcacgcttgacagagcgtgcgaccagtttggaccgcaaagacgat
aatttgaccaacaaggaaaagactttggaacaaaaggaacaaagtctgaccgataaagct
aagcacattgatgagcgtgaacaagaagttgtaaaactcgaagaacaaaaagctttggag
ttagaacgagtggcggccctcagtcaagaagaggcgaaggaaatcatccttaccgataca
cgtgataaactgacgcatgaaattgcgactcgtatcaaggaagcagagcgtgaagtaaaa
gaacgttctgacaaaatggcaaaggacttgttagcccaagcgatgcaacgcatatcaggt
gaatatgtggctgagcagacgattacatcggttcatttaccggatgatgcgatgaaggga
cggattattggacgtgagggtcgaaatattcgtacctttgaaagtctcacaggtatcgat
gttatcattgatgatacaccagaagtggttgttctatcaggttttgatccgattcgccgt
gagattgcccgtatgaccatggagaccttgcttcaagatggtcgtattcatccagctcgt
attgaggagttggttgagaaacatcgtgtagagatggataaccgtattcgtgagtacggg
gaagctgctgcttatgaagttggggcaccaaaccttcatccagacttgattaaaatcatg
gggcgtttgcatttccgtacctcttatggacaaaatgttcttcgccactcaatcgaagtt
gctaaattagcaggtgtacttgctgctgaattgggcgagaatgtgaatttggcacgtcga
gctggtttcctacatgacgttggtaaagctattgaccgtgaggtggatggaagccacgtt
gaaatcggtacagaattagctaagaaatataaagagaatccaattgttatcaatgcgatt
gctagtcaccatggcgatgtagaagcaacaagtactattgcagtcattgtggctgcggca
gatgctctgagcgctgctcgtccaggttcacgtcgtgaatctatggaagcctacatcaaa
cgtctgcaagacttggaagaaatcgccaacagttttgaagggattaaacaatcctatgct
attcaggctggtcgtgaaattcggattatcgttcatcctaacaaggtcactgatgatcag
attaccatcttggcccatgatgttcgtgagaaaattgaaaataatctggattatccagga
aatatcaaaatcacagttatccgtgaaacaagagcaacagatgttgctaagtaa
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