Streptococcus suis SC070731 (serotype 2): NJAUSS_0804
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Entry
NJAUSS_0804 CDS
T02536
Name
(GenBank) ATP-dependent exoDNAse beta subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ssus
Streptococcus suis SC070731 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssus03400
]
NJAUSS_0804
Enzymes [BR:
ssus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NJAUSS_0804
DNA repair and recombination proteins [BR:
ssus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NJAUSS_0804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
DUF2059
AAA_30
ResIII
AAA_7
AAA_16
AAA_22
PIF1
Motif
Other DBs
NCBI-ProteinID:
AGG64277
LinkDB
All DBs
Position
866357..870007
Genome browser
AA seq
1216 aa
AA seq
DB search
MAFEQFLSAEEIKAVQLAEAHSDKQQKRTAEQIEAIYTHGQNVLVSASAGSGKTFVMVQR
ILDKLKRGIGIDQLFISTFTVKAAGELKERIEKKLNETIAETTDMELRRHLSAQLADLTK
ADIGTMDSFTQKLVTTYGYSLGISPQFRILQDETEKASLKKEVFDQLFADYLEEDENGAF
RKLVRNFSGNRKDNSGFRQVVYQVHDFSQSTSSPTKWLKEQAVQADLYSQERIEQMLEQG
FKEKVLDKLYQAADFFRYHVEWGRNDFGSAKYFANVEEVLDLLTGLDSLDQKDLMERVER
ILLINNQSRGKGLTNANRPKDEHLIAFKEEYNAGKSQIISELRDLGQEVYELTLLKDYQV
QALPLLILLRDFVLDFSQAYLDVKIKEAAFEFGDIGHFAIRILEENADIRQFFQEKYHEV
MVDEYQDNNHSQERMLDLLSNGHNRFMVGDIKQSIYRFRQADPMIFQEKFELYQANPQSG
KLILLKENFRSQIEVLEATNAIFTRLMDRQVGEIKYDDTHSLVAGSPGQKIAQPKNEMEY
LIYDQQDSANSSTDAEEETPLTAGEIEVVAKEIIRLHNEEGADFKDITLLVQKRTHNDLI
MSIFEKHGIPIVADGGAASYLQSLEVMIMLDTLRVINNPLNDYALVALLKSPMFRFDEDE
LTRISLQAGTGFFYQKMEIAQQASGQHPELMSEKLKKKITDFLSILENWRAYAKLHSIYD
MIWKMFNEKFYYDYVGALPNGSKRQANLYALGLRANQFEKTGYKGLSRFIAMIDRALAND
KDLADVQEFLPQNAVQLMTIHKSKGLEFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQ
YLADMKDKVNSPLPQVRVLMNTLPYQNNLQELKIANLSEQMRLLYVALTRAEKKLYLVGK
GNADKLAEKYDGKKENGVLAQSTRESMATFQDWILAIDEAFSGEDLHFKKVFVTDEDLTE
EKIGKLTLKSKLEDASLKDIRQSEDIAQALDQLSSVQELNERYKAAIELPSLRTPSQIKK
LYEPILEQEGMEVMEKYQPKRTFNLPDFSKKPKITGAQVGSAVHELMQRLDLSWLVTEDT
VRAALEAVHAEQAIKDKINVQMILDFFDTDLGREILANTDKLHREAPFASLQTDSVSQEN
FVLRGIIDGYLLYDDHIVLFDYKTDKYDQPIQLSQRYQAQMQLYAEALKKAYKIDRVDCH
LILLGGERIEVVEVNI
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaacaatttttaagcgcggaagaaatcaaggctgtgcagctggcggaagcc
cattctgataagcagcaaaaacgcacagctgagcagattgaagctatctacacgcacggt
cagaatgttctggtctctgcatcggctgggtcaggaaagactttcgtcatggttcaacgg
attttggataagttgaagcgtggtatagggattgaccagctctttatctcgacctttaca
gtcaaggcggctggtgaattgaaggagcggattgagaaaaagctcaatgaaactattgcg
gagacgaccgatatggaattgcgtcggcatttgtcggcccagttggcagatttgactaag
gcggatattgggaccatggactcctttacgcagaaattggtgaccacctatggttatagc
cttggtatttctccgcagtttcggattttacaggatgagactgaaaaagcgagtctgaaa
aaagaggtttttgaccagctctttgcagattatcttgaagaggatgaaaatggtgcattc
cgcaaactggttcgcaatttttcgggcaaccgcaaggataatagtggtttccgtcaggtt
gtttatcaggtgcatgattttagccaatcgacgagtagtccaactaaatggctgaaagaa
caggctgttcaagctgatttgtacagtcaagagcgtatagagcagatgctagagcaaggc
tttaaggaaaaagtgttagacaagctctatcaagctgcagatttcttccgctaccatgtg
gaatggggcagaaatgactttgggtctgctaaatattttgcaaatgtggaagaagtcttg
gatttgttgacaggtttagatagtctggaccagaaggacttgatggaacgggttgaaaga
attcttctcatcaataatcagtccagaggcaagggcctgaccaatgccaatcgaccaaaa
gatgagcatttgatagcctttaaagaagaatacaatgctggtaagagccagattatctca
gaactacgagatttgggtcaggaagtttatgaattgaccctgctgaaagactatcaggtt
caagctttgccactactgatattattacgtgactttgtcttggatttttcgcaggcttat
ctggatgtcaaaatcaaggaagcagcctttgaatttggcgacattgggcatttcgctatt
cgtattttagaagaaaatgcggacattcgccagtttttccaagagaaatatcacgaagtc
atggtggacgagtaccaggataacaaccatagccaagagcgaatgctggacctgctgtct
aacggtcacaaccgctttatggtgggtgatattaagcagtccatctatcgattccgtcag
gcggatccgatgattttccaagagaaatttgaactgtatcaggcaaatcctcagtctggg
aaattgattttgctcaaggaaaatttccgtagtcagattgaagtcttggaggcaacaaat
gctattttcacgcgcctgatggaccgtcaagtaggggaaatcaagtatgacgacacccac
agtctagtggctggtagtcctggtcaaaaaattgcccagcccaagaatgagatggaatac
ttgatttacgatcagcaggatagcgcaaactcttcaacagatgctgaggaagaaacacct
ctgactgctggtgaaattgaggtcgttgcaaaagagattattcgtcttcacaatgaagaa
ggagcagacttcaaggacatcactctcttggtacaaaagcggacgcacaatgacctcatt
atgtccatttttgaaaaacatgggattccaattgtggcagatggcggagcagcctcctat
ctgcaatctttagaagtcatgatcatgctggataccttgcgggttatcaataatccactc
aatgactatgccttggttgccctgcttaaatcacctatgttccgattcgatgaagatgaa
ctgacacggatttccttgcaggccgggacaggtttcttttaccagaaaatggaaatagcc
cagcaagcaagtgggcaacatcctgaactgatgtcagaaaagttgaagaagaaaatcacg
gatttcttgtctattttggaaaattggcgtgcctatgccaaactgcattctatttatgac
atgatttggaagatgttcaatgaaaaattctactatgactatgtcggtgcgcttccaaat
ggcagcaagcgtcaggccaatctatacgcacttggtctgcgtgccaaccagtttgaaaaa
acaggctacaagggattgtctcgcttcatcgccatgattgatcgtgccttagcaaatgac
aaggacttggcagatgtacaagagtttctaccgcaaaatgctgtacagcttatgactatt
cacaagtcaaaaggtttggagttcaagtatgtcttcctcatgaacatcgataagcgattt
aacttggaagaccattaccaatcagtcatcatcagccggaaaaatggtctaggtatccaa
tatttagcagatatgaaagataaggtaaatagcccattacctcaggtgcgagtcttaatg
aacaccctcccttatcaaaataatctccaagagctaaaaattgccaatctttcggaacaa
atgcggttgctttatgttgcactaacacgtgctgagaagaagctgtatctggttggaaag
ggtaatgctgacaagttagctgaaaaatacgatggcaaaaaggaaaatggcgtactagcc
caatcaactcgtgaaagtatggcgaccttccaagactggattctagccattgatgaggcc
ttctcaggagaagacttgcacttcaagaaagtctttgtgacggatgaggatttgacagag
gagaagattggtaaacttacattgaagagtaagctagaagacgccagccttaaagatatt
cgtcaatcagaagacatcgcccaggccttggaccagttgtcttctgtccaagagttgaac
gaacgctataaggctgctatagaattgccaagtttacggactccaagtcaaatcaagaag
ctctatgagcctattttggaacaagaaggcatggaagttatggaaaaataccagcccaaa
cggaccttcaacttgccagatttctccaagaaaccaaaaatcactggagcccaagtcggt
tcagcagtgcatgaactcatgcaacgcttggatctgtcttggttggtgacagaagatacg
gtaagagcagccctagaagctgttcatgctgagcaagcgattaaagataaaatcaatgtt
cagatgattttggatttctttgatacagacttaggaagagaaattctagccaatacggac
aaactccaccgagaagctccatttgcaagtttgcagacagattctgtatctcaggaaaac
tttgtccttcgtgggattatcgatggctacctactgtatgatgatcatattgtcctcttt
gattacaagacagacaaatatgaccaaccaatccaactcagccaacgttaccaagctcaa
atgcaactctatgcggaggcattgaaaaaagcctacaagatagatcgtgtagactgccat
ttgattttgcttggtggggagagaatagaagtggtcgaagtcaacatatag
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integrated database retrieval system
