Streptococcus suis SC070731 (serotype 2): NJAUSS_1327
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Entry
NJAUSS_1327 CDS
T02536
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ssus
Streptococcus suis SC070731 (serotype 2)
Pathway
ssus02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssus00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NJAUSS_1327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssus03021
]
NJAUSS_1327
Transcription machinery [BR:
ssus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NJAUSS_1327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DUF2316
DprA_WH
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
AGG64789
LinkDB
All DBs
Position
complement(1413684..1414802)
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AA seq
372 aa
AA seq
DB search
MTNKKDKKTEVTTFDVQVAEFIRNHKKQGSATDDEINDQLVIPFTLDADGIDDLLQRIQD
AGISIVDKEGNPSARAMQVEEEPELSDEELLGSTSAKVNDPVRMYLKEIGVVPLLTNEEE
QELALAVEAGDPEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDY
SKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPE
QIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLR
EQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHP
SRSKPLRDFIED
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaaaaagataaaaaaacagaagtaactacttttgatgtacaagttgccgaa
tttatccgtaaccataaaaaacaaggttcagctacagacgatgaaatcaatgaccaactg
gttattccatttacgcttgatgctgacggaatcgatgatttgctccaacgtattcaggac
gcagggatttcgattgttgataaagaagggaacccttctgctcgtgctatgcaggtagag
gaagaaccagaattatctgatgaagaattgctcggaagcacttctgcaaaagtgaacgac
ccagtccgcatgtatttgaaagaaattggtgttgtacctcttttgaccaacgaggaagag
caagaattggcattggcggttgaggcaggtgacccagaagcgaaacaacgtttggctgaa
gccaacttgcgtttggttgtatccattgctaaacgctatgtcggccgtggtatgcagttc
cttgatcttatccaagaaggaaacatgggcttgatgaaggctgttgataagttcgactac
tctaaaggtttcaagttttcaacctatgcaacctggtggattcgtcaggctatcactcgt
gccattgcggaccaagcgcgtacaatccgtatccctgttcacatggtagaaaccattaac
aaattggtccgtgaacaacgcaatctcttgcaggaattgggccaagatccaactccagag
caaatcgctgagcgtatggatatgacgcctgagaaagttcgtgaaatcctcaagattgcc
caagagcctgtttcactcgagaccccaattggtgaagaagatgatagtcatcttggagat
tttatcgaagacgaagtcattgaaaatccagttgattacacaactcgtgtcgttcttcgt
gaacagttagatgaggtattggatactcttactgaccgtgaggaaaacgtattgcgtctt
cgttttggtttagatgatggtaaaatgcgtacgcttgaagatgttggtaaagtctttaac
gtaacccgtgaacgcatccgccaaatcgaagccaaagccctccgtaaactccgccaccca
tcccgcagcaaaccactaagagattttattgaggattga
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