Streptococcus suis SC070731 (serotype 2): NJAUSS_1605
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Entry
NJAUSS_1605 CDS
T02536
Name
(GenBank) superfamily II DNA/RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ssus
Streptococcus suis SC070731 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssus03019
]
NJAUSS_1605
03009 Ribosome biogenesis [BR:
ssus03009
]
NJAUSS_1605
Enzymes [BR:
ssus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NJAUSS_1605
Messenger RNA biogenesis [BR:
ssus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NJAUSS_1605
Ribosome biogenesis [BR:
ssus03009
]
Prokaryotic type
rRNA helicases
NJAUSS_1605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGG65066
LinkDB
All DBs
Position
complement(1682503..1683846)
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AA seq
447 aa
AA seq
DB search
MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGESKTGSGKTHTFLIPIF
QKLNEELDQVQAVITAPSRELATQIYQAARQLASHSDTEVRVTNYVGGTDKNRQIDKLQA
SQPHIVVGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIENWLISTKGRDRNAQILEVTKLM
QPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDIPPRERKRMMNQVKNLDYQYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGIAITLYQPSDDADIRELEKL
NIKFLPKEMKNGEFVDTYDRDRRANREKSREKLDLEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRVEARAKGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagatatgaaactcaagccttatattcaggaggctttgaaagaaattaac
tttgtccagccgacagaagttcaggagaaattgattcctgttgttttgtcagggcgagac
ttgataggggaatcaaaaacaggttcaggtaagacccataccttcttgatcccgattttt
caaaaattaaatgaggaattggaccaagttcaggctgttattacagccccatctcgtgaa
ctggctactcagatttatcaagcggcacgccagttggctagtcattcggacacagaagtt
cgtgtgaccaattatgttggcggtacggataagaaccgtcaaattgacaagcttcaagct
agtcagcctcacattgttgttgggacaccagggcgtatctatgatttggtcaaatcaggt
gaccttgctatccataaagccaaaacctttgtggttgatgaggcagatatgaccttggac
atgggctttttggaaacagttgataagattgctggcagcctgccaaaagacttgcaattt
atggtcttttcagcgaccattccgcagaaactccaaccgtttttgaaaaaatacttgtcc
aatccagtcatggaacaaatcaagacccatacggtcatttcggataccattgaaaactgg
ctgatttcaaccaaggggcgtgaccgtaatgctcaaatcttggaagtaaccaagctcatg
caaccttacttggccatgatttttgtcaatacaaagacacgtgcagatgaattgcatagc
tatttgactgcgaacggtcttcgtgtcgcaaagattcatggggatattcctccacgtgag
cgcaagcggatgatgaaccaggtgaagaacttggactatcagtacattgttgcaacggat
ttagcagcacgtgggattgatattgagggcgtcagtcatgtcatcaatgatgccattcca
caggatctttccttctttgttcaccgtgtggggcgcacaggtcgtaatggtttatcaggc
attgccattaccctttatcagccaagcgatgatgcagatattcgagagctagaaaaactc
aatatcaaattcttgccaaaagaaatgaaaaatggcgaatttgtcgatacctacgaccgt
gaccgccgtgctaaccgtgaaaaatctcgtgaaaaactagatttggaaatgattggcttg
gtcaagaagaaaaagaaaaaagtcaaaccaggctacaagaagaaaattcaatgggctgtt
gatgaaaaacgtcgcaagaccaagcgagttgaagcgcgtgcaaagggtcgtgcagaacgt
aaagccaagcgtcaaaccttttaa
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