Streptococcus suis SC070731 (serotype 2): NJAUSS_1799
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Entry
NJAUSS_1799 CDS
T02536
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ssus
Streptococcus suis SC070731 (serotype 2)
Pathway
ssus03030
DNA replication
ssus03430
Mismatch repair
ssus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NJAUSS_1799
03430 Mismatch repair
NJAUSS_1799
03440 Homologous recombination
NJAUSS_1799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssus03032
]
NJAUSS_1799
03400 DNA repair and recombination proteins [BR:
ssus03400
]
NJAUSS_1799
Enzymes [BR:
ssus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NJAUSS_1799
DNA replication proteins [BR:
ssus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NJAUSS_1799
DNA repair and recombination proteins [BR:
ssus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NJAUSS_1799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
B
Motif
Other DBs
NCBI-ProteinID:
AGG65260
LinkDB
All DBs
Position
complement(1893731..1898122)
Genome browser
AA seq
1463 aa
AA seq
DB search
MSDKFQLLLQQIGMPLDARQSGAFSTATIEKVVLHKVSKLWEFTFRFETPLPLMDYQLFK
ARLATEFEKVGNKIQFSIVSDAEAFEAGLVEAYYPEAFTEDLCQSAGFKALFQPLEVAYR
DGVLWIKGPETIDTDHFRKNHLPNLVEQYKRFGFGNLAVDIQVCQEMTQQQAEIFHAQNA
EIYQQANEENLAALEQLAQMAPPPEAAQPFVPEYKKNRPAKVNIEKAEITPMIEVDSEEN
RIVFEGLVFEVEQKTTKTGRVIINFKMTDYTSSFTLQKWAKNEEEAQKFDMVKKGNWLRV
RGNVETNNFTRDLTMNVQEVQEVKKEIRKDLMPEGEKRVEFHAHTNMSTMDALPAVEDLV
ARAAAWGHKAVAITDHGNVQSFPHGYHAARKAGIKPLFGMEANIVEDSVPIAYNEADVVL
SDATYVVFDVETTGLSAVNNALIQIAASKMHKGNIIAEFDEFIDPGHPLSQFTTDLTGIT
DEHVRGSKPLEQVLREFQDFCQDSVMVAHNATFDVGFMNVNYERAGLPIISQPVIDTLEF
ARNLYPDFKRHGLGPLTKRFGVALEHHHMANYDAEATGRLLFIFLKDALEKHNLTNLNQL
NTELIAEDSYKKARVKHATLYVINQVGLKNMFKLVSLSNTKYFEGVPRIPRTVLNAHREG
LILGTACQEGEVFDDLLSKGIDEAVKTAAYYDFIEVMPPALYAPMIAKEQFKDMAEIEET
IKQLIEVGRRAGLPVLATGNVHYIDPEEEIYREIIVRALGQGAPINWTIGNGENAQPAPL
PKAHFRTTSEMLDEFAFLGESLAREIVITNPNAMLDRFEDVQVVKTDLYTPYIEKAEETV
AELTYQKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVHRSNERGYLVGSR
GSVGSSFVATMIGITEVNPMPPHYVCPNCQHSEFITDGSYGSGFDLPDKDCEKCGTKYKK
DGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEENAFRAGTVGTVAAKTA
YGFVRGYERDYGKFYRDVEVERLAAGAAGVKRTTGQHPGGIIVFPDYMDVYDFTPVQYPA
DDVTASWQTTHFNFHDIDENVLKLDILGHDDPTMVRKLQDLSGIDPQTIPADDKGVMALF
SGTEILGVTPEQIGTPTGMLGIPEFGTNFVRGMVEETKPTTFSELLQLSGLSHGTDVWLG
NAQDLIKAGIANLSTVIGCRDDIMVYLMHAGLPPKMAFNIMERVRKGLWLKISEEERNGY
IQAMKDNKVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPLYYYCAYFSIRAK
AFDLATMSGGLERVKAKMEEIALKKKNNEASNVEQDLYTTLELVNEMLERGFKFGKLDLY
KSHATDFLIEEDTLIPPFVAMDGLGENVAKQVVAARAEGEFLSKTELRKRGGLSGTLVEK
MDEMGILGKMPEDNQLSLFDDLF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataagtttcaactcttgctacaacaaatcggaatgcctcttgatgcacgacaa
tcaggggctttttcgactgcaacgattgagaaagtagtcttgcacaaggttagcaaactt
tgggaatttaccttccgttttgaaacccccttgccgctcatggactatcaactcttcaag
gctcgtttggcgacggagtttgaaaaggtgggcaataagattcaattttctattgtcagc
gatgcggaggcttttgaagctggtttggtagaagcatattatccagaagcttttacggaa
gatttgtgccagagtgcaggcttcaaggccctttttcagccattagaggtggcttataga
gatggtgttttgtggataaaaggtcctgaaaccattgacacagatcattttcggaagaat
catctgccaaatcttgtggagcaatacaagcgatttggttttggtaatcttgcggtggac
atccaagtctgtcaggaaatgacgcagcaacaagcggagattttccatgcgcaaaatgca
gaaatttaccagcaggctaatgaagaaaacttggcggcccttgaacaactagctcaaatg
gcgccaccaccagaggcagctcagccatttgtcccagaatataagaaaaatcgtcctgcc
aaggtcaatatcgaaaaggctgagattacgcctatgattgaggtggatagcgaggagaat
cggattgtctttgagggactggtctttgaggtcgagcagaagacgaccaagacggggcgg
gtcattatcaactttaagatgaccgactatacttcgtccttcaccttgcagaagtgggct
aagaatgaggaagaggctcagaagtttgatatggtcaaaaagggaaactggctgcgggtg
cgaggcaatgtggaaaccaataatttcactcgtgatttgactatgaacgtacaggaagtc
caagaggtcaagaaggaaatccgcaaagatctcatgcctgagggtgagaagcgggttgag
tttcatgcccataccaacatgtccactatggatgccctgcctgccgttgaggacttggtg
gcgcgtgcggcagcctggggacacaaggcggtggccattaccgaccacggcaatgtccag
tccttcccccatggctatcatgctgctcgtaaagctgggattaagcccctcttcgggatg
gaggctaatattgtcgaggactctgtgcccattgcttacaacgaagcagatgtagtcctg
tctgatgccacctatgtggtctttgacgtggaaacaaccggtctgtctgcagtcaacaat
gccctgattcagattgcggcgtctaagatgcacaagggcaatatcattgcagaatttgat
gagtttatcgatccaggtcatccgctcagtcaatttacaacagatctgacaggaatcaca
gatgagcatgtgcgtggttctaaacctctagaacaagtcctgcgtgagtttcaagatttc
tgtcaagattccgtcatggttgcccacaacgcgacctttgacgttggctttatgaatgtc
aactatgaacgagcaggcttacctattattagccagcctgtcattgataccttggaattt
gctcgtaacctttaccccgactttaagcgtcatggtttaggtcctctcaccaagcggttt
ggtgttgctcttgaacaccaccacatggccaactacgatgcggaggcgacagggcgcctg
ctcttcatcttcctaaaagatgctctggagaagcacaatttgaccaatctcaaccagcta
aatacggagctgattgcggaggattcctataagaaggctcgtgtcaagcatgccacgctc
tatgtgattaatcaggttggtttgaaaaatatgttcaaactggtctctctttccaatacc
aagtattttgagggagtcccacgtattccacggaccgttctcaatgcccatcgtgaaggt
ttaatattgggaacagcctgtcaagagggtgaggtcttcgatgacttgctctccaaaggg
atagatgaagcggttaaaacggcagcctattatgattttatcgaagttatgccacctgcc
ctctatgctcccatgattgccaaggagcagtttaaggacatggcagagattgaagagact
atcaagcagttgattgaggtaggacgtagggcaggtctgcctgttctggcgactggaaat
gtccactacattgacccagaagaggaaatttatcgggaaatcattgttcgtgctctaggt
caaggggcaccgattaactggaccatcggaaatggtgaaaacgctcagccagcaccactg
ccaaaagcccactttagaacgaccagcgagatgttggacgagtttgcattcttgggagaa
agtctggcccgtgagattgtcattaccaatcccaatgccatgctggaccggtttgaagat
gttcaggtggttaagaccgacctttatacgccttatattgagaaggccgaggaaacggtc
gcggaattgacctatcagaaagcctttgagatttatggcaaccccttgccagacattatc
gacctgcgaatcgaaaaggaactgacttccattttaggtaatggattcgccgtgatttac
ctggcatcgcagatgttggtgcaccgttccaacgagcggggctacctggtgggttcacgg
gggtctgtcggctccagtttcgttgcgaccatgattgggattaccgaagtaaaccctatg
cctcctcactatgtctgtccaaattgtcaacacagtgaatttatcacagatggttcctat
ggttcaggttttgacctgccagacaaggattgtgaaaagtgtgggaccaagtataaaaaa
gatggacaggacattcctttcgagaccttccttggtttcgatggagacaaggttcccgat
attgacttgaacttctcaggggatgaccaaccgtctgcccatttggatgttcgggatatt
tttggtgaagaaaatgccttccgtgcaggaacggttggtacggtagctgccaagactgcc
tatggttttgtccgaggctatgagcgggattatggcaaattctatagagatgtggaagta
gaacgcctggctgctggagcagctggtgtcaaacgaacgactggtcagcacccaggggga
attattgtatttcctgactacatggatgtctatgactttacccctgttcagtatcctgcc
gatgatgtgacagccagctggcagaccacccactttaacttccacgatattgatgaaaac
gtcttgaaactcgatattctgggacacgatgatccaaccatggttcggaagttgcaggac
ttgtcaggcatcgatccgcaaactattcctgctgatgataagggggttatggctcttttt
tctggtacggaaattctgggtgttaccccagagcagattgggacaccgacaggtatgctg
ggcattcctgaatttggaaccaactttgtacgggggatggtggaggaaaccaaaccgacc
actttttcggaactcttgcagttatctggtctatcgcacggtacagacgtttggttgggc
aatgcccaggacttgattaaggcaggaattgctaatctatctactgttatcggttgtcgg
gatgacatcatggtttacctcatgcacgcaggtttgccacctaagatggcctttaatatc
atggagcgggtgcggaagggcttgtggctcaagatttctgaggaagagcgaaatggctac
attcaagccatgaaggataacaaggtgccagactggtacatcgaatcctgtggaaaaatc
aagtacatgttccctaaagcccacgcggctgcctacgttatgatggccttgcgggttgcc
tatttcaaggttcatcacccactttactactattgcgcttatttctctattcgggccaag
gcatttgatttggcaaccatgtccggtggcttggaacgagtcaaggctaagatggaagaa
atcgccctcaagaagaaaaacaatgaagcttcgaacgttgagcaggatctctataccaca
cttgaattggtaaatgaaatgctggaacgtggcttcaagttcggtaagttggacctctac
aaatcccatgcgaccgactttctgattgaagaagataccctcatcccaccatttgtcgct
atggatggtctgggagagaacgttgccaagcaggttgtggcggcgcgtgccgaaggagaa
tttctctccaagacagaactccgtaaacgtggtggattgtcaggtacgcttgttgaaaaa
atggatgaaatgggcatcctcggtaaaatgccagaggataaccagttgagtctctttgat
gatttgttttaa
DBGET
integrated database retrieval system
