Streptococcus suis TL13 (serotype 16): TL13_0572
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Entry
TL13_0572 CDS
T02672
Name
(GenBank) ABC transporter, transmembrane region:ABC transporter
KO
K18217
ATP-binding cassette, subfamily B, tetracycline resistant protein
Organism
ssut
Streptococcus suis TL13 (serotype 16)
Pathway
ssut02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TL13_0572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssut02000
]
TL13_0572
01504 Antimicrobial resistance genes [BR:
ssut01504
]
TL13_0572
Transporters [BR:
ssut02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TL13_0572
Antimicrobial resistance genes [BR:
ssut01504
]
Gene variants
Tetracycline resistance genes
Transporters
TL13_0572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
Zeta_toxin
AAA_15
RsgA_GTPase
AAA_22
AAA_29
MMR_HSR1
AAA_30
APS_kinase
Gtr1_RagA
nSTAND3
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AGL47502
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All DBs
Position
571739..573478
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AA seq
579 aa
AA seq
DB search
MTILGFLLKQIGRVKWLFIVAVGFYLLASTMVRLAPLLIQQAIDGPITDLSKGLPFDEAV
FLNQSVQYMGMIILGAIGFYLSMRLLMHCANRIAENLRNQAYDVMQRLPISYFDDKPAGK
IATRIVNDTETLRTQFYGTLVNAFNNIVRLLFTYGVLFYMNRSLGWLMLLLIPLYIGIQF
AYKKMTDKPMKDFYDARSDVNTQVNETMNGASLIQLFGQEERIMREFEVTADKMRRADNK
IIWAQSLATWNLSGFLQNLVIAAILTVVGYQFLAGQDGVTAGKLFVYVNYIEGVFIALGA
LVQQFPNMLRSFETGKRLMALLEEEVEDDCDRILEVEQGQVVFEHVNFSYEENRPVLKDI
TIRAEKGETVALVGHTGSGKSSIMNLLYRFYDPQEGRVRIDGKNIRDYSRESLRSHMGIV
LQDPYLFTGTIASNVSMNEEEADRTRILQALEKVGAGPMLSRLEKGIDEPVVEKGAAFSS
GERQLIAFARTLYSDPKILILDEATSHIDTETEEIIQHAMEVVKEGRTTFIIAHRLSTIQ
NADQILVLDQGRIIEHGKHEELVARGGVYAQMHEIQAKV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgactattttaggttttttattaaaacaaatcggtcgtgtcaagtggctatttatagta
gctgtcggcttctatctattggcttcgaccatggttcgattggctcctctgctgattcag
caggcgattgatggaccgattacggatttaagcaagggtttgccctttgatgaagctgtt
ttcttaaaccagtcagttcaatacatgggaatgattattctgggagctattggcttctac
ctatctatgcgtttactcatgcattgcgccaatcgtattgctgaaaatctgcgtaatcaa
gcctacgatgttatgcaacggttgcctatttcttattttgatgataagcccgctggaaaa
attgcaactagaattgtcaatgatacagaaaccctgcggacacaattttatgggacctta
gttaatgcctttaacaatattgttcgtttgctctttacatatggtgtcctattttacatg
aataggagtctcggttggctgatgttactcttgataccactctatatcggtattcaattt
gcttacaagaaaatgacagacaagccaatgaaggatttttatgatgcaaggagtgacgtc
aatacacaggtaaacgagaccatgaatggtgcaagtttgattcaactttttggacaagaa
gagcgcatcatgagagaatttgaagtgactgctgacaagatgcgtcgggcagataataag
attatctgggcccagtctcttgccacgtggaatctgagtggttttctgcaaaatttggtc
attgctgcgattttaacggtagtcggctatcagtttcttgcgggacaggatggagttaca
gctgggaaactctttgtttatgtcaactatatcgaaggagtcttcattgctttgggagcg
ctggttcaacagttcccaaatatgcttcgctcttttgaaacaggtaagcgtctaatggcc
cttctagaagaagaggtggaggacgactgtgatcgtattttggaagttgaacaagggcaa
gtcgtgtttgaacatgtgaactttagctatgaagaaaacagaccagttttgaaagatatt
accattcgggcagaaaaaggagaaacagttgctctggttgggcatactgggtctggtaag
tcttctattatgaacctcctctatcgtttctatgatccacaggagggacgtgtacggatt
gatgggaaaaacatccgtgattattctcgtgaaagcctgcgcagtcacatggggattgtt
ttgcaagatccctatctctttacagggacgattgccagcaatgtttccatgaatgaagag
gaagcagatagaacaagaatcctgcaggcgctagaaaaagttggtgcagggcctatgcta
tctcgcttagagaaagggattgatgaaccagttgttgagaagggggcggccttttcaagt
ggggaacgtcagttgattgcctttgcgcggacactctactctgatcctaaaattctgata
ttggatgaagcaacttctcatattgatacggagacggaagaaattatccaacatgccatg
gaagtggtgaaagaaggtcggacaacctttattattgctcaccgactttctaccattcaa
aatgcagaccagattcttgtcttagatcaaggtcgaattattgaacatgggaaacatgaa
gaattggttgcacgtggtggagtatatgctcaaatgcatgagattcaagcaaaggtgtaa
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