Streptococcus suis TL13 (serotype 16): TL13_0621
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Entry
TL13_0621 CDS
T02672
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssut
Streptococcus suis TL13 (serotype 16)
Pathway
ssut03030
DNA replication
ssut03410
Base excision repair
ssut03420
Nucleotide excision repair
ssut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TL13_0621 (polA)
03410 Base excision repair
TL13_0621 (polA)
03420 Nucleotide excision repair
TL13_0621 (polA)
03440 Homologous recombination
TL13_0621 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssut03032
]
TL13_0621 (polA)
03400 DNA repair and recombination proteins [BR:
ssut03400
]
TL13_0621 (polA)
Enzymes [BR:
ssut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TL13_0621 (polA)
DNA replication proteins [BR:
ssut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TL13_0621 (polA)
DNA repair and recombination proteins [BR:
ssut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TL13_0621 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TL13_0621 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AGL47551
LinkDB
All DBs
Position
623046..625682
Genome browser
AA seq
878 aa
AA seq
DB search
MKKNKLLLIDGSSVAFRAFFALYNQIDRFKNANGLHTNAIYGFNLMLDHMMKRIEPTHIL
VAFDAGKTTFRTEMYADYKAGRAKTPDEFREQFPFIRQMLDAMGVKHYELAQYEADDIIG
TLDKMAERTEVPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEFEEFTPAYLMEKMGISP
TQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSLDGIYENIDSMKASKMKENLIAD
KEKAFLSRTLATIDTQAPIEIGLDDIVYQGPKLEELGQFYDDMGFKQLRAQLGTTSSQEE
AVLDFQIVTEISPAMLKQDQFFYFEILGENYHREDLVGLAWGDKEKIYVGGPELLDSPVL
RDFLENQTIKTYDFKRGKVLLDRKEITLPPATFDSRLAKYLLSTVEDNSLTTIANLYGQT
SLVPDEAIYGKGAKLDLPEREIFFPHLARKVQVLIETEEPMLTKLEENQQLDLLFDMELP
LANVLAKMEIAGIKVEAETLKAMQSENEVLIDQLTKEIYELAGQEFNINSPKQLGTILFE
DMGLPLEYTKKTKTGYSTAVDVLERLAPIAPVVSKILEYRQITKLQSTYVVGLQDAILED
GKIHTRYVQDLTQTGRLSSTDPNLQNIPVRLEQGRLIRKAFVPSLENSVLLASDYSQIEL
RVLAHISQDKHLIEAFQQGADIHTSTAMRVFGIEKAEDVTPNDRRNAKAVNFGVVYGISD
FGLSNNLGITRKEAKAYIDTYFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINS
RNFNVRNFAERTAINSPIQGSAADILKVAMINLDKALTEAGLATRMLLQVHDEIVLEVPV
AELETVKAMVKETMESAISLSVPLIADENEGSTWYEAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataaattattattaatcgatggctcttcggtagccttccgtgctttcttt
gcactttataaccaaattgaccgcttcaagaatgccaacggtctgcataccaacgccatt
tacggcttcaacctcatgctggaccacatgatgaagcggattgagccgacccacatcttg
gtggcttttgatgccggaaagaccaccttccgtacggagatgtacgccgattacaaggcc
ggtcgtgccaagacaccagacgagttccgtgaacaattccccttcatccggcagatgttg
gatgctatgggggtcaaacactatgagctggctcagtacgaggcggacgatattatcggt
accttggacaaaatggcagagcggacagaggtgcctttcgatgtgaccattgtcagcggt
gacaaggacttgatccagctgactgatgagaacaccgtagtcgaaatttccaagaaaggc
gttgccgaattcgaagaatttaccccagcctacctcatggaaaaaatggggattagccct
actcagtttattgacctcaaggctttgatgggagataagtccgataacattcctggcgtg
accaaaatcggtgaaaaaacaggtctaaaactcctgacagaatttggttctttggatggt
atctacgaaaacattgacagcatgaaggcttctaagatgaaagaaaacctgattgctgat
aaggagaaggccttcctatctcgtacacttgctaccattgatactcaggcaccaatcgaa
attggtctggatgacattgtttatcaaggtccaaagctagaagaactaggacaattctac
gatgatatgggcttcaagcaattaagggctcagttaggtacgaccagctcgcaagaggaa
gcggtacttgatttccaaatcgtaacggaaatcagccccgctatgctcaaacaagaccag
tttttctattttgaaatcttgggtgaaaattatcaccgagaggatttggttggtttagct
tggggggataaggagaaaatctatgtcggagggcctgagctacttgatagtccagtcttg
cgtgactttttagaaaaccaaaccataaaaacctatgactttaagcgtggaaaagttctt
ctcgaccgaaaagagattacgctacctccagccactttcgatagccgtctagccaaatac
ttgctttccaccgttgaggacaattccctgacaaccattgccaacctctatggtcagacc
agtcttgttccagatgaggcaatttacggcaagggtgctaagttagacttgccagaacgc
gagatctttttcccacacttggcacgtaaggttcaggttttgattgagacagaagagccg
atgttgaccaaattagaagaaaatcagcaattagatcttttgtttgacatggagttgcca
ctggcaaatgttttagctaagatggaaattgctggtattaaggtggaagctgagactctc
aaagctatgcaatctgaaaacgaagttttgattgaccagttgaccaaggaaatctatgaa
ctagctggtcaggaatttaatatcaattcgcctaagcagcttgggaccattctctttgaa
gatatgggactaccgttggaatataccaagaaaaccaagacaggctattcaacagcagta
gatgtcttagaacgattagcgccaattgcaccagttgtgtcaaaaatcttggaataccgt
cagattaccaagcttcaatcaacttatgtagtcggcttgcaggatgccattttagaagat
ggtaagatccatacccgctatgtacaggatttgacacaaacaggtcgtctatcttcgacg
gatcctaacttgcaaaatattcctgttcgtctagaacaagggcgcttgattcgtaaggca
tttgtgccatcgcttgaaaatagtgtccttttagcatcggactattcacagattgaattg
cgcgtcttggctcatatttctcaggacaagcatttgattgaggccttccagcaaggtgca
gatattcacacttcgacagctatgcgggtcttcggtatcgaaaaagctgaggatgtgaca
ccaaatgaccgtcggaatgccaaggctgtaaacttcggtgtcgtctatggtatttcagat
ttcggtctatccaataacttggggattacacgtaaggaagctaaagcctatatcgatacc
tattttgaacgcttcccaggaattaagaattacatggaaaccattgttcgtgaggcacgt
gataaggggtatgtagagacgatttacaaacgccgtcgtgaattaccagatataaactct
cgcaatttcaatgtccgtaattttgcggaacgaacagccatcaactcaccaattcaaggt
tcggccgcagatattctcaaagtagccatgattaatcttgacaaggctttgactgaagca
ggtcttgcgacacgtatgttattgcaagtacacgatgagattgttttggaagtcccagtg
gcagagctagaaacggtaaaagccatggtaaaagagactatggaatcggcgattagcctg
tctgtaccattgattgcggatgaaaatgaaggttcaacatggtatgaagcaaagtaa
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