Streptococcus suis TL13 (serotype 16): TL13_0687
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Entry
TL13_0687 CDS
T02672
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssut
Streptococcus suis TL13 (serotype 16)
Pathway
ssut03410
Base excision repair
ssut03430
Mismatch repair
ssut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TL13_0687 (recJ)
03430 Mismatch repair
TL13_0687 (recJ)
03440 Homologous recombination
TL13_0687 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssut03400
]
TL13_0687 (recJ)
DNA repair and recombination proteins [BR:
ssut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TL13_0687 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TL13_0687 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TL13_0687 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
TPP_enzyme_N
AlaDh_PNT_C
Phage_T4_Ndd
Toprim
ThiG
PIGA
Motif
Other DBs
NCBI-ProteinID:
AGL47617
LinkDB
All DBs
Position
696475..698688
Genome browser
AA seq
737 aa
AA seq
DB search
MIKPNYDWQLLTGFSDEQFIKIAKKEGVDPVAAKLLYERGIHSAEELHTFLQPSLEDLHD
PYLLHDMDKAVERIRRAIEDYEQILIYGDYDADGMTSASILKETLEEMGAEVQVYLPNRF
TDGYGPNQSVYKYFIEQQGISLIVTVDNGVAGHEAIAYAQEMGVDVVVTDHHSMQETLPN
AYALVHPEHPEGNYPFKHLAGCGVAFKLACALLETVHADLLDLVAIGTIADMVSLTDENR
VMVKYGLSLLKQTERAGLQELIKIAGIDIDSIDEETVGFQLAPRLNALGRLDDPNPAIEL
LTGFDDEEAHQIALMIDSKNVERKDVVQAIYDEAKTMLRQDRPVQVLAKEGWNPGVLGIV
AGRLLEELQQPVIVLSIEDGKAKGSARSVEAVDIFKALKDHQDLFIAFGGHAGAAGMTLE
VDKLEELAQTLADYIIENKLDLSSKSSLVLDEELDLEELTLDTLKSFEKLAPYGMDNKKP
VFYIRDFQVELARTMGHNNAHLKLRITKGAAGFDVVAFGKGNLALEFSQAKGLELAVTLS
VNQWNGNTSLQLMLVDARVNGVQLYNIRGKQHPIPAGVPILDIENPVADNKAIVLANLPE
DLSSLRSYFQEREFEAIYFKNEIAKPYYLDGYGSREQFAKLYKTIYQFDEFDVRYKLKDL
AGYLKIKDSLLVKMIQIFQELEFVTITDGVMRVNKEAQKREISESQIYQELKETVIQQEL
MALGTVQEIYEWLCGRV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgataaaacccaattatgactggcaattattgaccggtttttctgatgaacaatttatc
aaaattgctaaaaaagaaggagtagacccggtagcggctaagttgctgtatgaacgtggc
atccattcggcggaagaattgcatactttcttacaaccaagcttagaagaccttcacgat
ccctatttactacatgatatggacaaggcggtggagcggattcgccgagcaatcgaagat
tacgaacaaattttgatttatggagattatgacgcagacggcatgacctcggcatctatt
ctgaaagaaactttggaggaaatgggggcagaagtccaagtttatcttcccaatcgtttc
acagatggttatgggccgaatcagtcagtttacaagtattttatcgagcagcaggggatt
tctcttattgtgacggtggacaatggcgtagcgggtcatgaagcgattgcctatgcccag
gaaatgggggtcgatgttgtcgtgacagaccaccattccatgcaggaaacccttcccaat
gcctatgcgcttgtacatccagagcatccagaaggaaattatcccttcaaacatttggcg
ggctgcggcgtggcttttaaattggcctgtgctcttcttgaaactgttcatgcagacttg
ctggatttggtcgcaattggcaccatcgctgatatggttagcttgaccgatgagaatcgt
gtcatggtcaaatatggtctctcgcttctcaaacagactgagcgagcaggtttgcaagag
ttgataaagatagctggtattgacatagacagtattgatgaagaaacagttggtttccaa
cttgctccgaggttgaatgcccttggtcgactcgacgatcctaatccagccatcgaatta
ctgactggttttgatgacgaagaggcccatcaaattgctctcatgattgatagtaaaaat
gtagaacgcaaagacgtcgtccaagcaatttacgatgaagcaaaaaccatgctccgtcag
gatagacctgttcaagttctggctaaagaaggttggaacccaggtgttttagggattgta
gcaggacgcttactagaagaattgcagcaacctgttatcgtcttgtctattgaagatggt
aaggcaaagggttcggctcgttctgttgaagcagttgacattttcaaggcccttaaagat
catcaggacctatttatcgcctttggtggtcatgctggtgcagcaggtatgaccttggaa
gttgacaaacttgaagagcttgctcaaaccttggctgactacattatcgaaaataaattg
gatttatccagcaagtcttcgctggtcttagatgaagaattggatttagaggaattaacc
ctagatactctaaaatctttcgagaagcttgcgccttacggcatggataataaaaagcct
gtattctacatcagagactttcaggtggaattagcaaggaccatggggcataataatgcc
catttgaaactacgcattactaaaggtgctgctggatttgatgtcgttgcttttggtaag
ggcaatctagccttggaattttcacaggccaagggcttagaactagctgtcaccttgtct
gtcaatcaatggaatggcaatactagtcttcagctcatgttggttgatgctcgggtcaac
ggtgttcaactttataatattcgtggaaaacaacatcctattcctgcaggagtcccaatt
ttggacattgaaaatccagtagcagataacaaagcaattgtcttggctaacttgcctgag
gacctcagtagtctgcgtagctattttcaggaaagagaatttgaagctatttattttaaa
aacgaaattgccaaaccgtactatctagatggttatggtagccgagaacaattcgctaaa
ttgtataaaaccatttaccaatttgatgagtttgatgttcgctacaaactgaaagattta
gctggttacttaaaaattaaggacagtctattggttaaaatgattcagattttccaagaa
ttagaatttgtcacgattacggatggggtcatgcgggtcaacaaagaggcacagaagcga
gagatttcagaaagtcaaatatatcaagaattgaaagaaacagttatccaacaagagttg
atggcgcttggcaccgttcaggaaatttatgaatggctatgtggtcgcgtttga
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integrated database retrieval system
