Streptococcus suis TL13 (serotype 16): TL13_1061
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Entry
TL13_1061 CDS
T02672
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssut
Streptococcus suis TL13 (serotype 16)
Pathway
ssut03420
Nucleotide excision repair
ssut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TL13_1061 (uvrD)
03430 Mismatch repair
TL13_1061 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssut03400
]
TL13_1061 (uvrD)
Enzymes [BR:
ssut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TL13_1061 (uvrD)
DNA repair and recombination proteins [BR:
ssut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TL13_1061 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TL13_1061 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGL47988
LinkDB
All DBs
Position
complement(1082679..1084958)
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AA seq
759 aa
AA seq
DB search
MNPLLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAREMKERAYALNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRSLM
KRILKNLNLDPKKWSERSILGTISNAKNDLIDDKAFEAQAGDLYTQIVAKCYTAYQKELR
QSEAVDFDDLIMLTLRLFDQNPEVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPESKVVLLEENYRSTKNVLQAANEVIENNRN
RRPKKLWTQNVQGDLITYYRARDENDEAIYVAGQIDQLHREGKAYKDFAVLYRTNAQSRT
IEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNIIANPSDNISYERIVNEPKRGVGPGT
VDKLRDFATSHSMSLLEASQDIMLSPIKGKAAQAVFDLANLLYNLRNQLDNLTVTQVVEA
VLNQTGYIDALAAQNTLEANARIENIQEFLSVTKNFDEKDAEEEETGLDRLTRFLLDLAL
IADTDDGDTESSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEEEDELEEERRLAY
VGITRAEQTLYLTNANSRLLFGRTNYNQPSRFIREISSDLLDYQGLARPANTSFKASYVN
GRATQFGQGMSLQQAMQNRKASVQPSAKLGGSMPFATSSKTSGSGTNWSVGDIAVHKKWG
RGTVLEVSGSGSNQELKINFPEMGLKKVLASLAPISKEE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaacccattattaaacggaatgaatgacagacaggcagaagcggtacagacgacggaa
ggtccgctattgattatggcaggggctggttcgggtaagacgcgagttctgacccaccga
atcgcttatttgattgatgaaaaaatggtcaatccttggaatatcttagccattaccttt
accaacaaagcggcgcgtgagatgaaggagcgggcctacgccctcaatcctgctacacaa
gactgtttgatagccaccttccactccatgtgcgtacggattttgcgtcgagatgctgac
catatcggctacaaccgtaacttcaccattgtggacccaggtgagcaacgcagtctcatg
aaacggattttgaaaaatctcaatctagacccgaaaaagtggagtgaacgttctattctg
ggaaccatttctaatgccaaaaacgacttgattgatgacaaggcatttgaagctcaggca
ggcgatttatacacgcagattgttgctaaatgctacacggcttatcaaaaggaactcaga
cagtcagaggccgttgactttgatgatttgatcatgttgacgctccgcctttttgaccaa
aatccagaggtcctgacctattaccagcagaaattccagtatatccatgtcgatgagtat
caggataccaaccatgcccagtaccaattggtcaagctcctggcatcacgtttcaagaat
atctgcgtggtcggtgatgcggaccagtctatctatggttggcgtggtgcggatatgcaa
aatatcctggactttgaaaaggactatccagaaagcaaggttgtccttttggaggaaaac
taccgctccaccaagaatgtcttgcaggctgccaatgaggtcatcgaaaacaaccgcaat
cgccgtcccaaaaaactctggacacagaatgtccaaggggatttgattacctactatcgt
gccagagatgaaaatgatgaagctatctatgtcgcagggcagattgaccagttgcaccga
gaaggtaaggcttataaggattttgcagttctctatcggaccaatgcccagtcccgtacc
attgaagaagccctgctcaaatctaatatcccttataccatggttgggggcaccaagttc
tacagccgtaaggaaatccgtgatgtgatttcttatttgaatatcatcgcaaatccatcg
gataatatttcctatgaacgcattgtcaatgagccaaaacgtggcgttggacctggtacg
gttgacaaactccgtgattttgcgaccagtcacagcatgtccttgctagaagcttctcag
gatattatgttgtcgccgatcaaagggaaggcagcacaggcagtctttgacctagccaat
ctcctctataatcttcgtaatcaattagacaacttgacggttacccaagtagtcgaggca
gtattgaaccaaacaggctacatcgatgcccttgccgcacaaaatacgctggaagctaat
gctcgcattgaaaacatccaggaattcctttctgttaccaaaaactttgatgaaaaggat
gctgaggaagaagagacaggtctggatcggttgacacgcttcctgcttgatttagcactg
attgcggatacagatgatggcgatacagaatcttcagaagtgaccctcatgactctccat
gcggccaagggtctggaatttccagtcgttttcttgattggcatggaggaaaatgtcttc
ccactcagtcgtgcagcagaagaagaggatgaattggaagaagaacgtcgtttggcttac
gtaggcatcacccgtgctgagcagactctctacctgaccaatgccaattctcgacttctt
ttcggtcgcaccaactacaaccaaccaagccgctttatccgagaaatttccagtgacctc
cttgactaccaggggctcgctcgtccagccaatactagctttaaggcttcttatgtcaat
ggcagagcgacacagtttggacaaggcatgagcttgcagcaggccatgcaaaaccgaaaa
gcatccgtacaaccatctgccaagctcggaggcagtatgcccttcgcaacaagtagcaaa
acgtctggctcaggcaccaactggtcagttggtgacatcgcagtccacaagaaatgggga
cgcggaactgtccttgaagtatcaggctcaggcagcaaccaagaactcaaaatcaatttc
ccagaaatgggcctcaaaaaagtcttggcaagcttagcaccgattagtaaggaagagtag
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integrated database retrieval system
