Streptococcus suis TL13 (serotype 16): TL13_1229
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Entry
TL13_1229 CDS
T02672
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssut
Streptococcus suis TL13 (serotype 16)
Pathway
ssut03030
DNA replication
ssut03430
Mismatch repair
ssut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TL13_1229 (dnaE)
03430 Mismatch repair
TL13_1229 (dnaE)
03440 Homologous recombination
TL13_1229 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssut03032
]
TL13_1229 (dnaE)
03400 DNA repair and recombination proteins [BR:
ssut03400
]
TL13_1229 (dnaE)
Enzymes [BR:
ssut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TL13_1229 (dnaE)
DNA replication proteins [BR:
ssut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TL13_1229 (dnaE)
DNA repair and recombination proteins [BR:
ssut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TL13_1229 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGL48156
LinkDB
All DBs
Position
complement(1258536..1261646)
Genome browser
AA seq
1036 aa
AA seq
DB search
MLAQLDTKTVYTFMDSMVTIENYVGKAKELGYHALGIMDKNSLYAAYSFMESCNKMGLQP
IIGCELDWKLQGEEQDVTTQLIALTTRGYRNLLKISTAKMTGQDDFETIRQYLVDIAVVV
PYFSGIEHLELGVNYYIGVTVDTPVQDFKQAILPIHTVRFFEEEQLESLQVLHAIRDNIP
LNQVVDIDSRQKLLSADSLTNLFSNRFPQAVDNLRDLVAGISYQLNTDLKLPRFNRDRPA
VEELYERSYQGLEEKGLTNSLYKERLEKELSIIHQMGFDDYFLIVWDLLRFGRSQGYYMG
MGRGSAVGSLVAYALNITGIDPVKHNLLFERFLNAERYSMPDIDIDIPDIHRADFIRYVR
DRYGSTHAAQIVTYSTFGAKQAIRDVFKRFGTPEYELSNITKKISFRDSLTSAYQRNAAF
RQIINSKIEYQKAFSIAQQIEGQPRQTSIHAAGIVMSDEDLTDTIPLKIGDDMLVTQYDA
HAVEANGLLKMDFLGLRNLTFVQKMAEGVRERYQQEIDVSKIDLEDKKTLELFAAGRTKG
IFQFEQPGAISLLRRVKPGRFEDIVATTSLNRPGASDYSDNFVKRKHGQETVDLLDPTIA
PILQPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNAQEMQAMEAEFLQGALKN
GHAEENAREIFGMMAKFAGYGFNRSHAYAYSALAFQMAYFKSHYTDVFFDVMLNHSSSAY
IEDAMQFDFEVARLTINNIPYHDKFDNSKVYLGLKTLKGLPKDLALWILDHRPYKSVEDF
ILRLPDNFKKKDLLIPLIQIGLFDDFDANRKKIIENLDNLFVFAEAIGTFFAEESYSWTD
VEDYSDSEKFMLEQELLGVGISPHPLVNICRESKRSFTDLADLAVGNRATVLVQIQAIRL
IRTKKTGEQMAFLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQERDGQLQLV
LEKLEPVSLEKFWILLENREHDYAVARILGKYRGSIPVVLHYQDSNQTIQAEHHMVMKTP
QLEEELSEFVMKTIFR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgctggcacaattagatacaaagacagtttatacctttatggatagcatggtgacgata
gaaaattatgtaggcaaggctaaagagcttggttaccacgcattggggataatggataaa
aacagtctttatgcagcctatagttttatggaatcctgtaacaaaatgggacttcaacca
attattggttgtgaactggactggaaattacagggagaggagcaggacgtcactactcaa
ttgattgctcttacaaccagaggttatcgcaatctattgaaaatttcgactgctaagatg
acagggcaagatgattttgaaaccattcgtcaatatttagtcgacatagcagtggttgtt
ccttatttttctggcattgagcaccttgagttaggtgttaactattatatcggagtgacg
gttgatacaccagttcaagactttaagcaagcaatactcccaattcatacggttcgtttt
tttgaagaggaacaattggaaagtctacaggttctccatgctattcgagataatattcca
cttaatcaagttgtagatatagatagtcgacaaaagcttttatcggctgatagcttaacc
aatctattttcgaatcggtttccgcaagcagttgataatttacgtgacttggttgcaggg
atttcttatcaattaaatacagatttaaaattgccgcgttttaatcgtgacagacctgca
gtggaagaattatacgagcgctcctatcaaggattagaagagaagggcttgactaattca
ctgtataaggaacgcttggaaaaggaattatccattattcatcaaatgggatttgatgat
tacttcttgattgtatgggacctacttcgttttggacgtagccaagggtactacatggga
atggggcgcggttcagctgttggaagcctagttgcctacgccttaaatatcacaggtatt
gatcctgttaagcataatcttctctttgaacgctttctcaatgctgaacgttattcaatg
cccgatattgatattgatattccagatattcatcgagcagattttattcgttatgtacga
gatcgttatggttcaacccatgctgcgcaaattgtaacctactcgacatttggagctaag
caggccattcgtgatgtatttaagcgtttcggaacacctgaatatgagttaagtaatatt
accaagaaaatttcatttagggatagtcttacttctgcctatcagcgaaatgccgctttt
cgtcagattatcaatagtaagatagagtaccaaaaagctttttcgattgctcaacaaatt
gaagggcaaccccgacagacttctatccatgcagcagggatagtgatgagtgatgaggac
ttgacagataccatccctcttaaaataggggatgacatgctggtaacccaatatgatgca
catgctgttgaggcgaatggtctgttgaagatggatttccttggcttacgaaatctgacc
tttgtgcaaaaaatggcagaaggagtacgtgaacgttatcagcaggaaattgatgtttcc
aagatagatttagaagataagaaaaccttggaactttttgctgctggtcggactaaggga
atttttcaatttgaacagcctggtgcgattagcctgcttcgaagggtcaaacctggtcga
tttgaagatatagttgcaacaacgagtttgaatagaccgggggctagtgattattcggat
aactttgtaaaacgcaaacatggacaagagacagttgatttgttggacccaaccattgct
cctattttacaaccgacttatggtatcatgctttatcaggaacaggtcatgcagattgca
caggtctatgcaggatttacgcttggcaaggcggatttactccgcagggcgatgtctaaa
aagaatgcccaggaaatgcaggcaatggaagcggaatttttacagggagcactgaaaaac
ggacatgctgaagagaatgcaagggaaatatttggcatgatggctaagttcgctggttat
ggttttaaccgtagccacgcctatgcttattcagccttagcctttcaaatggcctatttc
aagagtcactatacggatgtcttttttgatgtcatgctcaatcattctagcagtgcttat
attgaagatgcgatgcagtttgactttgaggtagctcgactcacgattaacaatattcct
tatcacgataagtttgataatagtaaggtctacctaggattaaaaacactaaaaggttta
cctaaagatttagctttatggatattggatcatcgtccctataagtctgtagaagatttt
attttgcgcttgccagataatttcaagaaaaaggatttactaatccctcttattcagatt
ggtttatttgatgattttgacgccaatcgtaaaaagattattgaaaatctagacaatctc
tttgtctttgcagaggcaattggtacattttttgcagaggagagttatagttggacagat
gtagaagattacagcgacagtgaaaaatttatgctagagcaagaattgctaggtgttggt
attagtccgcatcctttagtcaatatttgtcgggagtctaagcgtagttttacagatttg
gctgatttagcggttggcaatcgagcgaccgttcttgtgcagattcaagctattcgattg
attcgtaccaaaaagactggggagcagatggcatttcttcgagtgacagataccaagagg
acgcttgacgtgactcttttcccagaatcttatcgccaatacgcttctattttggaagaa
gggggaatggggtacatcacaggtagagtgcaagagcgcgatggacagttgcaattagtt
ctagaaaaattagagcctgtcagtttggagaaattttggattcttttggaaaatcgagaa
cacgattatgctgttgctcgtattttgggtaaatatagaggaagcattccagtagtactt
cattatcaagatagtaatcagacaattcaggctgagcaccacatggttatgaaaacgcct
caattagaagaagagttaagtgaatttgttatgaaaacgatttttcgataa
DBGET
integrated database retrieval system
