Streptococcus suis TL13 (serotype 16): TL13_1540
Help
Entry
TL13_1540 CDS
T02672
Symbol
yqfR
Name
(GenBank) ATP-dependent RNA helicase YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ssut
Streptococcus suis TL13 (serotype 16)
Brite
KEGG Orthology (KO) [BR:
ssut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssut03019
]
TL13_1540 (yqfR)
03009 Ribosome biogenesis [BR:
ssut03009
]
TL13_1540 (yqfR)
Enzymes [BR:
ssut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TL13_1540 (yqfR)
Messenger RNA biogenesis [BR:
ssut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TL13_1540 (yqfR)
Ribosome biogenesis [BR:
ssut03009
]
Prokaryotic type
rRNA helicases
TL13_1540 (yqfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGL48465
LinkDB
All DBs
Position
complement(1547256..1548599)
Genome browser
AA seq
447 aa
AA seq
DB search
MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGESKTGSGKTHTFLIPIF
QKLSEELDQVQAVITAPSRELATQIYQAARQLASHSDIEVRVTNYVGGTDKNRQIDKLQA
SQPHIVVGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIENWLISTKGRDRNAQILEVTKLM
QPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDIPPRERKRMMNQVKNLDYQYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGIAITLYQPSDDADIRELEKL
NIKFLPKEMKNGEFVDTYDRDRRANREKSREKLDLEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRVEARAKGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagatatgaaactcaagccttatattcaggaggctttgaaagaaattaac
tttgtccagccgacagaagttcaggagaaattgattcctgttgttttgtcagggcgagac
ttgataggggaatcaaaaacaggttcgggtaagacccataccttcttgatccctattttc
caaaaattaagtgaggaattggaccaagttcaggctgttattacagccccatctcgtgag
ttagctactcagatttatcaagcggcacgccagttggcaagtcattcggacatcgaagtt
cgtgtgaccaattatgttggcggtacggataagaaccgtcaaattgacaagcttcaagct
agtcagcctcacattgttgttgggacaccagggcgtatctatgatttggtcaaatcaggt
gaccttgctatccataaagccaaaacctttgtggttgatgaggcagatatgaccttggac
atgggctttttggaaacagttgataagattgctggcagcctgccaaaagacttgcaattt
atggtcttttcagcgaccattccgcagaaactccaaccgtttttgaaaaaatacttgtcc
aatccagtcatggaacaaatcaagacccatacggtcatttcagataccattgaaaactgg
ctgatttcaaccaaggggcgtgaccgcaatgctcaaatcttggaagtaaccaagctcatg
caaccttacttggccatgatttttgtcaatacaaagacacgtgcagatgaattgcacagc
tatttgactgcgaatggtcttcgtgtcgcaaagattcatggggatattcctccacgtgag
cgcaagcggatgatgaaccaggtgaagaacttggactatcagtacattgttgcaacggat
ttagcagcacgtgggattgatattgagggcgtcagtcatgtcatcaatgatgcaattcct
caagatctttccttctttgtccaccgtgtgggacgcacaggtcgtaatggtttatcaggt
attgccattaccctttatcagccaagtgatgatgcagatattcgagagctagaaaaactc
aatatcaaatttttgccaaaagaaatgaaaaatggcgaatttgtcgatacctacgaccgt
gaccgccgtgctaaccgtgaaaaatctcgtgaaaaactagatttggaaatgattggcttg
gtcaagaagaaaaagaaaaaagtcaaaccaggctacaagaagaaaattcaatgggctgtt
gatgaaaaacgtcgcaagaccaagcgagttgaagcgcgtgcaaagggtcgtgcagaacgt
aaagccaagcgtcaaaccttttaa
DBGET
integrated database retrieval system
