Streptococcus suivaginalis: PXH68_04440
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Entry
PXH68_04440 CDS
T10940
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssuv Streptococcus suivaginalis
Brite
KEGG Orthology (KO) [BR:
ssuv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssuv03032
]
PXH68_04440 (topA)
03400 DNA repair and recombination proteins [BR:
ssuv03400
]
PXH68_04440 (topA)
Enzymes [BR:
ssuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PXH68_04440 (topA)
DNA replication proteins [BR:
ssuv03032
]
Prokaryotic type
DNA Topoisomerases
PXH68_04440 (topA)
DNA repair and recombination proteins [BR:
ssuv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PXH68_04440 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HypA
DUF2996
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WNY47964
UniProt:
A0AA96VG40
LinkDB
All DBs
Position
956159..958252
Genome browser
AA seq
697 aa
AA seq
DB search
MATKTATKKKASPKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLKKSSMSIDFEN
NYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAISWHLAHILGLDEADKNRV
VFNEITKDAVKNAFKEPRAINHDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQ
SVALKLIIDRENEINQFKPEEYWTIDGAFKKGSKKFQASFYGLDGKKVKVENNEQVKEIL
ARIQGNDFLVEQVERKERKRNAPLPYTTSTLQMDAANKINFRTRKTMMIAQQLYEGVSLG
TGGSQGLITYMRTDSTRISPIAQSQAAEFITERFGVTYSKHGSKVKNASGAQDAHEAIRP
SNVYLTPESVAKYLDKDQIRLYTLIWNRFVASQMAAAVFDTMSVRLGQNGVLFAANGSQI
KFDGYMAVYNDADKNKMLPDMEAGDTVVRTTTNPEQHFTQPPARYSEATLIKTLEENGVG
RPSTYAPTIETIQKRYYVKLAAKRFEPTELGEIVNKLIVEFFPDIVNVTFTAEMEQKLDD
VEIGKEEWQKIIDGFYQSFKVELEKAEAEMEKIQIKDEPAGFDCEVCGHEMVIKLGKYGK
FYACSNFPDCRNTKQITKEIGVTCPDCQKGQVIERKSKRNRLFYGCDRYPECEFTSWDKP
VGRSCPKCDHYLVEKKVRGGGKQVVCPNGDYEEEKVK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaaacagcaactaagaaaaaagcaagccctaaaaagaatttggtcatcgta
gagtcgcctgccaaggcaaaaacgattgagaagtatttgggacggaactacaaagtagtg
gcatctgttggacatattcgtgacttgaaaaaatccagcatgtcgattgattttgaaaat
aattatgccccagagtatatcaatattcgaggaaagggccctctaattaattctctgaaa
aaagaagctaagaatgccaaacaagtctttctggcgagtgacccggaccgtgaaggagaa
gcaatttcttggcatttggctcatatcttgggcttggacgaagcagacaaaaaccgtgta
gtcttcaatgaaattaccaaagatgctgtaaaaaatgccttcaaggaaccacgcgctatt
aaccatgatttggttgatgctcaacaagcgcgccgtgtcttagaccgtatcgtaggctat
tctatttcacctattttatggaaaaaagttaagaaaggtttgtcagctggccgtgtgcaa
tccgtggctctgaagttgattatcgatcgtgaaaatgaaatcaaccagtttaagcctgaa
gaatactggacaattgatggagcctttaagaagggcagcaagaaattccaagcatccttc
tatgggttagatggtaaaaaagttaaggttgaaaacaatgagcaagtgaaggaaatcttg
gctcgcatacaagggaatgatttcttggtagagcaggttgagcgtaaggaacgcaagcga
aatgctcctctgccttataccacatcaaccttacagatggatgcggcgaataagattaat
ttccgaacccgtaaaaccatgatgattgcccagcaactttatgaaggagttagccttgga
acaggtggttcgcagggtctgataacctatatgcgtaccgattcgacacgtatcagccca
attgcccagagccaggcagctgagtttattacagaacgatttggtgttacctattccaaa
catggcagtaaggtgaaaaatgcttctggtgcccaggatgcgcacgaagccattcgccca
tctaatgtttacctaacaccagaatctgttgccaaatacttagataaggaccaaattcgt
ctctacaccttgatttggaaccgctttgtagctagccaaatggcagcggccgtttttgat
accatgagtgttcgtttaggtcaaaatggtgtgctcttcgcagcgaatggtagccagatt
aagtttgacggctacatggcagtttataacgatgcagataaaaacaagatgttgccagat
atggaagctggtgatactgtcgtacggactacaacaaatccagagcagcactttacacaa
ccaccagctcgttattcagaggcaaccttgatcaagaccttggaagaaaatggagttggt
cgtccatcaacctatgcaccaaccattgaaaccattcagaaacgctactatgtcaaactg
gcagccaagcgatttgaaccaaccgaattgggagaaattgtcaataaattaattgttgag
tttttccctgacatcgtcaatgtgacctttacagctgaaatggaacagaaattggatgat
gttgaaatcggcaaggaagaatggcaaaaaattattgatggcttttaccaatccttcaag
gtggagcttgagaaggcagaagctgagatggaaaaaatccagatcaaggatgagccagct
ggttttgattgtgaggtttgtggacatgaaatggtcatcaagctaggtaaatacggtaaa
ttttatgcttgtagtaatttccctgactgccgtaataccaaacaaatcaccaaagaaatc
ggcgtaacctgtccagactgtcaaaaaggtcaggttatcgagcgcaagagcaaacgtaat
cgtctcttctacggttgcgaccgttatcctgaatgtgaattcacttcttgggacaagcca
gttggtcgttcctgtccaaaatgtgaccattatctcgtagagaagaaggtccgtggcgga
ggcaaacaggttgtctgtccaaatggagattacgaagaagaaaaagtaaaataa
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