Streptococcus suivaginalis: PXH68_05465
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Entry
PXH68_05465 CDS
T10940
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssuv Streptococcus suivaginalis
Pathway
ssuv03410
Base excision repair
ssuv03430
Mismatch repair
ssuv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssuv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PXH68_05465 (recJ)
03430 Mismatch repair
PXH68_05465 (recJ)
03440 Homologous recombination
PXH68_05465 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssuv03400
]
PXH68_05465 (recJ)
DNA repair and recombination proteins [BR:
ssuv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PXH68_05465 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PXH68_05465 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PXH68_05465 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Toprim
SseB_C
AlaDh_PNT_C
TPP_enzyme_N
PIGA
Motif
Other DBs
NCBI-ProteinID:
WNY46343
UniProt:
A0AA96VDG0
LinkDB
All DBs
Position
complement(1163196..1165412)
Genome browser
AA seq
738 aa
AA seq
DB search
MITSNYNWEILPGFSDNDFIKLAKKEGLDPLAAKLLYERGIQTKEALTRFLQPSLEDLHD
PYHLHDMDKAVERIRRAIEDYEQILIYGDYDADGMTSASILKETLEELGAEVRVYLPNRF
TDGYGPNQSVYKYFIEQEGISLIVTVDNGVAGHEAIAYAQEMGVDVVVTDHHSLQETLPN
AYAIVHPEHPAGNYPFKHLAGCGVAFKLACALLETIHADLLDLVAIGTIADMVSLTDENR
VMVKYGLSLLKQTERAGLQELMQIAGIEPASLDEETVGFQIAPRLNALGRLDDPNPAIDL
LTGFDEEEAHEIALMIDAKNTERKEIVQDIYNQAKEMIDPNQPVQVLAKEGWNPGVLGIV
AGRLLEEVQQPIIVLSIEDGRAKGSARSVEAVDIFQALKEHQDLFIAFGGHAGAAGMTLE
VDKLDTLSETLADYIRTNNLENASKSSLVIDEELDLEELTLDTLKSFDKLAPYGMDNKKP
VFYVKDVQVESARTMGQGNAHLKVRLVKGQAAFDLVAFGQGNKALEFSQAKNLELAVTLT
VNQWNGNTSLQLMLVDARVEGVQLYNIRSKQQALPDGVPVLDMTDLSPLVGAQSLVLAQL
PENLSDLKSVFQDHDFQAIYFKNEIKTPYYLDGYGSRDQFAKLYKTIYQFKEFDVRYKLA
ELANYLKIKQPLLVKMIQIFQELGFVTITDGVMTVNSEAEKRAIADSQIYQELKQQVMEQ
ELMALGTVQEIYNWLMEN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgattacatcaaactataactgggagattcttccaggtttttccgataatgattttatc
aaattagcaaaaaaagaaggcttagatccgcttgcagctaagctcctctatgagagaggt
atccagaccaaggaagccttgaccagatttttgcaaccgagtttagaggatttacatgat
ccctatcacctccatgatatggataaggcggtggagcggattcgtcgggcgattgaggac
tatgagcaaatcttgatttatggggactacgatgcagacggcatgacttcggcatcaatc
cttaaggaaactttggaggaattaggagcagaggttcgggtctatcttcccaatcgtttt
acggatggttacggccccaatcagtcagtctataagtatttcattgaacaggaagggatt
tccctgattgttaccgtagataatggtgtagctggtcatgaggctatcgcctatgcccaa
gaaatgggtgtcgatgtcgtagtgacagaccaccattctttacaggagaccttgcccaat
gcctatgccatcgttcacccagaacacccagcgggcaactatcctttcaaacatttggcg
ggctgtggtgtggcttttaagctagcctgtgcgcttcttgaaacaatccatgcagacttg
ctggatttggttgctattggtaccattgcggacatggtcagcttgactgatgaaaaccga
gtcatggtcaaatatggtttatcacttctcaagcagacagaacgagcaggtttacaggag
ttgatgcagattgcagggattgagcccgctagtctagatgaagaaaccgttggttttcaa
attgctccacgcctgaatgctcttgggcgtttggacgatcccaatccagccattgatttg
ctgacaggctttgacgaggaagaagctcatgagattgccctcatgatcgatgctaaaaat
actgaacgtaaggaaattgtacaggacatttataaccaagccaaggaaatgattgacccc
aatcaacctgttcaggttcttgccaaagagggttggaatcctggtgttctgggaattgtt
gcaggtcgtctcttagaagaagtacaacaacctattattgttttgtccatagaagatggt
cgtgccaaaggttctgcccgttcggttgaagcagttgacattttccaagctcttaaggaa
catcaagatctctttatcgcctttggcggtcatgctggagcagctggaatgaccttggaa
gtagacaagctcgataccttatctgaaacgctcgcagactatattcggaccaataacctc
gaaaatgccagcaagtctagcttggtcatagacgaagaattggacttggaagaattaacc
ttagatacgctcaaatcttttgacaaactggcgccatatggtatggacaataaaaaacca
gttttttatgtgaaagatgtgcaggttgagtctgcaagaactatgggacaggggaatgcc
cacctcaaagtccgtctggtcaagggacaagcagcttttgatttagtagctttcggtcaa
gggaacaaagccttggagttttctcaagcaaagaatttggagttggcagtgaccctgacg
gtcaaccagtggaacggcaataccagtcttcaattaatgctggttgatgctcgagtagaa
ggtgtccagctctataacatccgcagtaagcaacaagccttgccggatggcgttcctgtt
ctggatatgactgatttaagtcctctagttggagcccaatcactagttctagcccagcta
ccagaaaatctgtctgaccttaaatccgtttttcaagaccatgattttcaggccatctat
ttcaaaaatgagatcaagacgccttattatctagatggatacggtagccgagaccagttt
gctaaactttacaagaccatttatcaatttaaagagtttgacgtccgatacaagctggca
gaattggcaaactacttgaaaatcaagcaaccgctcttggttaaaatgattcagattttc
caagaacttggctttgtcaccatcacggatggtgtcatgacggtcaattctgaggctgaa
aaacgtgccattgcagacagtcagatttaccaagagttgaaacagcaggtcatggaacaa
gaacttatggcccttggaacggtacaagaaatctataattggctgatggaaaactag
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