Streptococcus suis YB51 (serotype 3): YB51_2915
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Entry
YB51_2915 CDS
T03173
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ssuy
Streptococcus suis YB51 (serotype 3)
Pathway
ssuy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YB51_2915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssuy03400
]
YB51_2915
Enzymes [BR:
ssuy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
YB51_2915
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
YB51_2915
DNA repair and recombination proteins [BR:
ssuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YB51_2915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Zn_ribbon_6
Auto_anti-p27
DUF4862
Motif
Other DBs
NCBI-ProteinID:
AGW86955
LinkDB
All DBs
Position
589264..590091
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AA seq
275 aa
AA seq
DB search
MPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL
LIYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSDGSTLVYQDVRKFGTMELLGK
ADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSHLLDQSLVAGLGNIYVDEVLF
KAKVHPAQTSNQLSAEQVADLRQATIEVLQLGIEKGGSTIRTYKNALGMDGTMQDYLQVY
GKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKHG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaattgcctgaggttgagacggttcgtcgtggtttgaatcgtttggtcaaggga
aaaattatttccaaggtggaggtgacctatgctcccatgattaagacaggtgtggatgcc
ttctgtcaggacttgattggtcaggagattttagatgtggaccgtcgtggcaagtatctc
ttgatttacctgacagaccatgtcctcatttctcatttgcggatggaaggtaagtacaat
ttctttcctgaccaggtgcctgccaacaaacatttccatgccttttttactttttcagat
ggctcgaccttggtctatcaagatgtccgcaagtttggcacaatggaactgctgggcaag
gcagatgtggatgcctattttatcagtcgaaaaattggtcctgagccgacggaggaagat
tttgacttagaagaatttgccaaaaagttagctaagtcgagaaaacccattaagtcgcat
cttttggaccagtctttggtggctggtttgggcaatatttatgtcgatgaggtcttgttc
aaggccaaagttcatcctgcacaaacgagtaatcagctatcagcagagcaggtggcagat
ctccgccaagctaccatagaagttctacaactgggaattgaaaaaggtggttcaaccatt
cggacttacaaaaatgccttgggcatggatgggactatgcaggattatttacaagtttac
ggaaagacagggcaggcctgtccccgttgccagacagagattgtcaaaatccagctgggc
ggacgggggacacatttctgtcccaagtgtcaggtgaaacatggctaa
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