Streptococcus suis YB51 (serotype 3): YB51_3000
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Entry
YB51_3000 CDS
T03173
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssuy
Streptococcus suis YB51 (serotype 3)
Pathway
ssuy03030
DNA replication
ssuy03410
Base excision repair
ssuy03420
Nucleotide excision repair
ssuy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YB51_3000
03410 Base excision repair
YB51_3000
03420 Nucleotide excision repair
YB51_3000
03440 Homologous recombination
YB51_3000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssuy03032
]
YB51_3000
03400 DNA repair and recombination proteins [BR:
ssuy03400
]
YB51_3000
Enzymes [BR:
ssuy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YB51_3000
DNA replication proteins [BR:
ssuy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
YB51_3000
DNA repair and recombination proteins [BR:
ssuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
YB51_3000
NER (nucleotide excision repair)
GGR (global genome repair) factors
YB51_3000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AGW86972
LinkDB
All DBs
Position
610775..613411
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AA seq
878 aa
AA seq
DB search
MKKNKLLLIDGSSVAFRAFFALYNQIDRFKSPTGLHTNAIYGFNLMLDHMMKRIEPTHIL
VAFDAGKTTFRTEMYADYKAGRAKTPDEFREQFPFIRQMLDAMGVKHYELAQYEADDIIG
TLDKMAERTEIPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEFEEFTPAYLMEKMGITP
TQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSLDGIYENIDSMKASKMKENLIAD
KEKAFLSRTLATIDTQAPIEIGLDDIVYQGPKVDELGQFYDDMGFKQLRAQLGTTSSQEE
AVLDFQIVTEISPAMLKQDQFFYFEILGENYHREDLVGLAWGDKEKIYVGGPELLDSPVL
RDFLENQTIKTYDFKRGKVLLDRKEITLPPATFDSRLAKYLLSTVEDNSLTTIANLYGQT
SLVPDEAIYGKGAKLDLPEREIFFPHLARKVQVLIETEEPMLTKLEENQQLDLLFDMELP
LANVLAKMEIAGIKVEAETLKAMQSENEVLIDQLTKEIYELAGQEFNINSPKQLGTILFE
EMGLPLEYTKKTKTGYSTAVDVLERLAPIAPVVSKILEYRQITKLQSTYVVGLQDAILED
GKIHTRYVQDLTQTGRLSSTDPNLQNIPVRLEQGRLIRKAFVPSLENSVLLASDYSQIEL
RVLAHISQDKHLIEAFQQGADIHTSTAMRVFGIEKAEDVTPNDRRNAKAVNFGVVYGISD
FGLSNNLGITRKEAKAYIDTYFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINS
RNFNVRNFAERTAINSPIQGSAADILKVAMINLDKALTEAGLATRMLLQVHDEIVLEVPV
AELETVKAMVKETMESAISLSVPLIADENEGSTWYEAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataaattattattaattgatggctcttcggtagccttccgtgctttcttt
gcactttataatcaaattgatcgttttaagagtccgacaggtcttcacaccaatgctatc
tacggctttaacctcatgctggaccacatgatgaagcggattgaaccgacccacattctc
gtggcttttgatgctggaaagaccaccttccgtacggagatgtacgccgattataaggca
ggtcgtgccaagacaccagacgagttccgtgaacaattccccttcatccgtcagatgctg
gatgctatgggggtcaagcattatgagctggctcagtacgaggcagacgatattatcggt
accttggacaaaatggcagagcggacagagattcctttcgatgtgaccattgttagcggt
gataaggacttgatccagctgacagacgaaaacaccgtagttgagatttctaagaaaggc
gtagccgaattcgaagaatttactccagcctacctcatggaaaaaatggggattacccct
actcagtttattgacctcaaggctttgatgggagataagtccgataacattcctggcgtg
accaaaatcggtgaaaaaacaggtctaaaactcctgacagaatttggttctttggatggt
atctacgaaaacattgacagcatgaaggcttctaagatgaaagaaaacctgattgctgat
aaggagaaggccttcctatctcgtacacttgctaccattgatactcaggcaccaatcgaa
attggtctggatgacattgtttatcaaggccccaaggtggatgaactaggacaattttat
gatgacatgggcttcaaacaattaagggctcagttaggtacgaccagctcgcaagaggaa
gcggtactcgatttccaaatcgtaacggaaatcagccccgctatgctcaaacaagaccag
tttttctattttgaaatcttgggtgaaaattatcaccgagaggatttggttggtttagct
tggggggataaggagaaaatctatgtcggagggcctgagctacttgatagtccagtcttg
cgtgactttttagaaaaccaaactataaaaacctatgactttaagcgtggaaaagttctt
ctcgaccgaaaagagattacgctacctccagccactttcgatagccgtctagccaaatac
ttgctttccaccgttgaggacaattccctaacaaccattgccaacctctatggtcagacc
agtcttgttccagatgaggcaatttatggcaagggtgctaagttagacttgccagaacgc
gagatctttttcccacacttggcacgtaaggttcaggttttgattgagacagaagagccg
atgttgaccaaattagaagaaaatcagcaattagatcttttgtttgacatggagttgcca
ctggcaaatgttttagctaagatggaaattgctggtattaaggtggaagctgagactctc
aaagctatgcaatctgaaaacgaagttttgattgaccagttgaccaaggaaatctatgaa
ctagctggtcaggaatttaatatcaattcgcctaagcagcttgggaccattctctttgaa
gagatgggactaccgttggaatataccaagaaaaccaagacaggctattcaacagcagta
gatgtcttagaacgattagcgccaattgcaccagttgtttcaaaaatcttggaataccgt
cagattaccaaacttcaatcaacttatgtagtcggcttgcaggatgccattttagaagat
ggtaagatccatacccgctatgtgcaggatttgacacaaacaggtcgtctatcttcgacg
gaccctaacttgcaaaatattcctgttcgtctagaacaagggcgcttgattcgtaaggca
tttgtgccatcgcttgaaaatagtgtccttttggcatcggactattcacagattgaattg
cgcgtcttggctcatatttctcaggacaagcatttgattgaggccttccagcaaggtgca
gatattcacacttcgacagctatgcgggtcttcggtatcgaaaaagctgaggatgtgaca
ccaaatgaccgtcggaatgccaaggctgtaaacttcggtgtcgtctatggtatttcagat
ttcggtctatccaataacttggggattacacgtaaggaagctaaagcctatatcgatacc
tattttgaacgcttcccaggaattaagaattacatggaaaccattgttcgtgaggcacgt
gataagggttatgtagagacgatttacaaacgccgtcgtgaattaccagatataaactct
cgcaatttcaatgtccgtaattttgcggagcgaacagctatcaactcaccaattcaaggt
tcggccgcagatattctcaaagtagccatgattaatcttgacaaggctttgactgaagca
ggtcttgcgacacgtatgttattgcaagtacacgatgagattgttttggaagtcccagtg
gcagagctagaaacggtaaaagccatggtaaaagagaccatggaatcggcgattagcctg
tctgtgccattgattgcggatgaaaatgaaggttcaacatggtatgaagcaaagtaa
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