Streptococcus suis 98HAH33 (serotype 2): SSU98_1325
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Entry
SSU98_1325 CDS
T00515
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssv
Streptococcus suis 98HAH33 (serotype 2)
Pathway
ssv03410
Base excision repair
ssv03430
Mismatch repair
ssv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSU98_1325
03430 Mismatch repair
SSU98_1325
03440 Homologous recombination
SSU98_1325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssv03400
]
SSU98_1325
DNA repair and recombination proteins [BR:
ssv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SSU98_1325
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SSU98_1325
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SSU98_1325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
TPP_enzyme_N
AlaDh_PNT_C
Toprim
ThiG
PIGA
Motif
Other DBs
NCBI-ProteinID:
ABP92483
LinkDB
All DBs
Position
complement(1248141..1250354)
Genome browser
AA seq
737 aa
AA seq
DB search
MIKPNYDWQLLTGFSDEQFIKIAKKEGVDPVAAKLLYERGIHSAEELHTFLQPSLEDLHD
PYLLHDMDKAVERIRRAIENYEHILIYGDYDADGMTSASILKETLEEMGAEVQVYLPNRF
TDGYGPNQSVYKYFIEQQGISLIVTVDNGVAGHEAIAYAQEMGVDVVVTDHHSMQETLPN
AYAIVHPEHPEGNYPFKHLAGCGVAFKLACALLETVHADLLDLVAIGTIADMVSLTDENR
VMVKYGLSLLKQTERAGLQELIKIAGIDIDSIDEETVGFQLAPRLNALGRLDDPNPAIEL
LTGFDDEEAHQIALMIDSKNVERKDVVQAIYDEAKTMLRHDRPVQVLAKEGWNPGVLGIV
AGRLLEELQQPVIVLSIEDGKAKGSARSVEAVDIFKALKDHQDLFIAFGGHAGAAGMTLE
VDKLEELALTLTDYIIENKLDLSSKSSLVLDEELDLEELTLDTLKSFEKLAPYGMDNKKP
VFYIRDFQVESARTMGQNNAHLKLRITKGAAGFDVLAFGKGNLALEFSQAKGLELAVTLS
VNQWNGNTSLQLMLVDARVNGVQLYNIRGKQHPIPAGVPILDIENPVADNKAIVLANLPE
DLSSLRSYFQEREFEAIYFKNEIAKPYYLDGYGSREQFAKLYKTIYQFEEFDVRYKLKDL
AVYLKIKDSLLVKMIQIFQELEFVTIADGVMRVNKEAQKREISESQIYQELKETVIQQEL
MALGTVQEIYEWLCGRV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgataaagcccaattatgactggcaattattgaccggtttttctgatgaacaatttatc
aaaattgctaaaaaagaaggagtggacccggtagcggctaagttgctgtatgaacgtggc
atccattcggcggaagaattgcatactttcttacaaccaagcttagaagaccttcacgat
ccctatttactacatgatatggacaaggcggtagagcggattcgccgagcaatcgaaaat
tacgaacacattttgatttatggagattatgacgcagacggtatgacctcggcatctatt
ctgaaagaaactctggaggaaatgggggcagaagtccaagtttatcttcccaaccgtttt
acagatggctatgggccgaatcagtcagtttacaagtattttatcgagcaacaggggatt
tctcttattgtgacggtggacaatggcgtagcgggtcatgaagcgattgcctatgcccag
gaaatgggtgtcgatgttgtcgtgacagaccaccattccatgcaagaaacccttcccaat
gcctatgcgattgtacatccagagcatccagaaggaaattatcccttcaaacatttggcg
ggctgcggcgtggcttttaaattggcctgtgctcttcttgaaactgttcatgcagacttg
ctggatttggtcgcaattggcaccatcgctgatatggttagcttgaccgatgagaatcgt
gtcatggtcaaatatggtctctcgcttctcaaacagactgagcgagcaggtttgcaagag
ttgataaagatagctggtattgacatagacagtattgatgaagaaacagttggtttccaa
cttgctccgaggttgaatgcccttggtcgactcgatgatccaaatccagccatcgaatta
ctgactggttttgatgacgaagaggcccatcaaattgccctcatgattgacagtaaaaat
gtagaacgtaaagacgtcgtccaagcaatttacgatgaagcaaaaaccatgctccgtcat
gatagacctgttcaagttctggctaaagaaggttggaacccaggtgttttagggattgta
gcaggacgcctactagaagaactgcagcaacctgttatcgtcttgtctattgaagatggt
aaggcaaagggttcggctcgttctgttgaagcagttgacattttcaaggcacttaaagat
catcaggacctatttatcgcctttggtggtcatgctggtgcagcaggtatgaccttggaa
gttgacaaacttgaagagcttgctctgaccttgacagactacattatcgaaaataaattg
gatttatccagcaagtcttcgctggtcttagatgaagaattggatttagaggaattaacc
ctagatactctaaaatctttcgagaagcttgcgccttacggcatggataataaaaagcct
gtattttacatcagagactttcaggtggaatcagcaagaaccatggggcagaataatgcc
catttgaaactacgcattactaaaggtgctgctggatttgatgttcttgcttttggtaag
ggcaatctagccttggaattttcacaggccaagggcttagaactagctgtcaccttgtct
gtcaatcaatggaatggcaataccagtcttcagctcatgttggttgatgctcgggtcaat
ggtgttcaactttataatattcgtggaaaacaacatcctattcctgcaggggtcccaatt
ttggacattgaaaatccagtagcagataacaaagcaattgtcttggctaacttgcctgag
gacctcagtagtctgcgtagctattttcaggaaagagaatttgaagccatttattttaaa
aacgaaattgccaaaccgtactatctagatggttatggtagccgagaacaattcgctaaa
ttgtataagactatttaccaatttgaagagtttgatgttcgctataaactgaaagatttg
gctgtttacttaaaaattaaggacagtctattggttaaaatgattcagattttccaagaa
ttagaatttgtcacgattgcggatggggtcatgcgggtcaacaaagaggcacagaagcga
gagatttcagaaagtcaaatatatcaagaattgaaagaaacagttatccaacaagagttg
atggcgcttggcaccgttcaggaaatttatgaatggctatgtggtcgcgtttga
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integrated database retrieval system
