Streptococcus suis 98HAH33 (serotype 2): SSU98_1441
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Entry
SSU98_1441 CDS
T00515
Name
(GenBank) DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
KO
K03086
RNA polymerase primary sigma factor
Organism
ssv
Streptococcus suis 98HAH33 (serotype 2)
Pathway
ssv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SSU98_1441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssv03021
]
SSU98_1441
Transcription machinery [BR:
ssv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SSU98_1441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
ABP92599
LinkDB
All DBs
Position
complement(1372196..1373314)
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AA seq
372 aa
AA seq
DB search
MTNKKDKKTEVTTFDVQVAEFIRNHKKQGSATDDEINDQLVIPFTLDADGIDDLLQRIQD
AGISIVDKEGNPSARAMQVEEEPELSDEELLGSTSAKVNDPVRMYLKEIGVVPLLTNEEE
QELALAVEAGDPEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDY
SKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPE
QIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLR
EQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHP
SRSKPLRDFIED
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaaaaagataaaaaaacagaagtaactacttttgatgtacaagttgccgaa
tttatccgtaaccataaaaaacaaggttcagctacagacgatgaaatcaatgaccaactg
gttattccatttacgcttgatgctgacggaatcgatgatttgctccaacgtattcaggac
gcagggatttcgattgttgataaagaagggaacccttctgctcgtgctatgcaggtagag
gaagaaccagaattatctgatgaagaattgctcggaagcacttctgcaaaagtgaacgac
ccagtccgcatgtatttgaaagaaattggtgttgtacctcttttgaccaacgaggaagag
caagaattggcattggcggttgaggcaggtgacccagaagcgaaacaacgtttggctgaa
gccaacttgcgtttggttgtatccattgctaaacgctatgtcggccgtggtatgcagttc
cttgatcttatccaagaaggaaacatgggcttgatgaaggctgttgataagttcgactac
tctaaaggtttcaagttttcaacctatgcaacctggtggattcgtcaggctatcactcgt
gccattgcggaccaagcgcgtacaatccgtatccctgttcacatggtagaaaccattaac
aaattggtccgtgaacaacgcaatctcttgcaggaattgggccaagatccaactccagag
caaatcgctgagcgtatggatatgacgcctgagaaagttcgtgaaatcctcaagattgcc
caagagcctgtttcactcgagaccccaattggtgaagaagatgatagtcatcttggagat
tttatcgaagacgaagtcattgaaaatccagttgattacacaactcgtgtcgttcttcgt
gaacagttagatgaggtattggatactcttactgaccgtgaggaaaacgtattgcgtctt
cgttttggtttagatgatggtaaaatgcgtacgcttgaagatgttggtaaagtctttaac
gtaacccgtgaacgcatccgccaaatcgaagccaaagccctccgtaaactccgccaccca
tcccgcagcaaaccactaagagattttattgaggattga
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