Streptococcus suis 98HAH33 (serotype 2): SSU98_1749
Help
Entry
SSU98_1749 CDS
T00515
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ssv
Streptococcus suis 98HAH33 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssv03019
]
SSU98_1749
03009 Ribosome biogenesis [BR:
ssv03009
]
SSU98_1749
Enzymes [BR:
ssv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SSU98_1749
Messenger RNA biogenesis [BR:
ssv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SSU98_1749
Ribosome biogenesis [BR:
ssv03009
]
Prokaryotic type
rRNA helicases
SSU98_1749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ABP92907
LinkDB
All DBs
Position
complement(1640969..1642312)
Genome browser
AA seq
447 aa
AA seq
DB search
MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGESKTGSGKTHTFLIPIF
QKLNEELDQVQAVITAPSRELATQIYQAARQLASHSDTEVRVTNYVGGTDKNRQIDKLQA
SQPHIVVGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIENWLISTKGRDRNAQILEVTKLM
QPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDIPPRERKRMMNQVKNLDYQYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGIAITLYQPSDDADIRELEKL
NIKFLPKEMKNGEFVDTYDRDRRANREKSREKLDLEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRVEARAKGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagatatgaaactcaagccttatattcaggaggctttgaaagaaattaac
tttgtccagccgacagaagttcaggagaaattgattcctgttgttttgtcagggcgagac
ttgataggggaatcaaaaacaggttcaggtaagacccataccttcttgatcccgattttt
caaaaattaaatgaggaattggaccaagttcaggctgttattacagccccatctcgtgaa
ctggctactcagatttatcaagcggcacgccagttggctagtcattcggacacagaagtt
cgtgtgaccaattatgttggcggtacggataagaaccgtcaaattgacaagcttcaagct
agtcagcctcacattgttgttgggacaccagggcgtatctatgatttggtcaaatcaggt
gaccttgctatccataaagccaaaacctttgtggttgatgaggcagatatgaccttggac
atgggctttttggaaacagttgataagattgctggcagcctgccaaaagacttgcaattt
atggtcttttcagcgaccattccgcagaaactccaaccgtttttgaaaaaatacttgtcc
aatccagtcatggaacaaatcaagacccatacggtcatttcggataccattgaaaactgg
ctgatttcaaccaaggggcgtgaccgtaatgctcaaatcttggaagtaaccaagctcatg
caaccttacttggccatgatttttgtcaatacaaagacacgtgcagatgaattgcatagc
tatttgactgcgaacggtcttcgtgtcgcaaagattcatggggatattcctccacgtgag
cgcaagcggatgatgaaccaggtgaagaacttggactatcagtacattgttgcaacggat
ttagcagcacgtgggattgatattgagggcgtcagtcatgtcatcaatgatgccattcca
caggatctttccttctttgttcaccgtgtggggcgcacaggtcgtaatggtttatcaggc
attgccattaccctttatcagccaagcgatgatgcagatattcgagagctagaaaaactc
aatatcaaattcttgccaaaagaaatgaaaaatggcgaatttgtcgatacctacgaccgt
gaccgccgtgctaaccgtgaaaaatctcgtgaaaaactagatttggaaatgattggcttg
gtcaagaagaaaaagaaaaaagtcaaaccaggctacaagaagaaaattcaatgggctgtt
gatgaaaaacgtcgcaagaccaagcgagttgaagcgcgtgcaaagggtcgtgcagaacgt
aaagccaagcgtcaaaccttttaa
DBGET
integrated database retrieval system
