Streptococcus suis GZ1 (serotype 2): SSGZ1_0744
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Entry
SSGZ1_0744 CDS
T02023
Name
(GenBank) putative exonuclease RexB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssw
Streptococcus suis GZ1 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssw03400
]
SSGZ1_0744
Enzymes [BR:
ssw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSGZ1_0744
DNA repair and recombination proteins [BR:
ssw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SSGZ1_0744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Phage_integr_3
UvrD_C
SVS_QK
Motif
Other DBs
NCBI-ProteinID:
ADE31201
UniProt:
D5AH86
LinkDB
All DBs
Position
788182..791448
Genome browser
AA seq
1088 aa
AA seq
DB search
MKLVYTDIRNPLTQYLTEQTATFAEQGKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIV
TRFGQLARYLMIDRKEAGQPLDDVGLAMIFFRVLSQFEDGDLKVYGRLQTDFGFINQLVA
LYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSKEGFEHQSKLAQLTGLVETGQ
LDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQATYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEV
VNQKEEVEQVATAIRQHVHQGARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEM
SHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQKELDLFESYILFADMKGQAAF
SRAFSVNGRADYDAEVIKEKRLVYDLTVLEPLRAKIMEPLNQLFKAGPQSGTALLEKFMA
FLEAIDLPKNMEKMSRNLSEVEQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAILQA
GMQASHYRTVPATVDVVNVKSYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEK
VNLVSASSSRFDLVSRENIKKNHAAMMSLLNSATEQLVISTPQIYNEGEDSLSPYIKILQ
KMGLKSEERGRIKTLSPQDIGHYKSLLSRLIESERPSLETEEWEGQRAFWTVLVRHLKKK
LESQSIEIPTITGDIASKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRL
REQESIHPTAFQHGLFLHRIFERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADA
RYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALVFDLQNGKSVHVNGTIDRLDT
LQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQ
ELYKQAAMDILAGRFAINPYTKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWM
ERMKGGQD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtctatacagatattcgcaatcctctgacgcagtatttgacagaacagaca
gcaacatttgccgagcagggcaaacgtgttttttatattgctccaaactctctatccttt
gagatggaacgcaaggtcttggaatacctgcctgaacaggcaacttttgatattatcgtg
acccgttttgggcaattggcccgctatttgatgattgataggaaagaagcaggtcaaccg
ctggatgatgttggtctggcaatgattttctttcgtgttctatcgcaatttgaagatggc
gacttgaaagtctatggtcgtttacagacagattttggtttcattaaccagctagttgct
ttatacaaagaattgcaacgggcaaatatgtctattttggacttggaagccatggactca
ccagataagcaggctgatttggtaaagatttttctggctgtaacagacattttgtccaaa
gaaggctttgagcatcagtctaagttagcacagttgactggcttggtagaaactggtcag
ttggatgagcagttgaagaacattgtgctggtggtagacggattttctcgtttttcggca
gaagaagaagctttagtaagtgctttaaatgaacgggtgtcggaaatcctgattggtgta
tatgccagcaagaaagctgtgcaagccacctatgcggaaggcaacgtctatcaagccaac
gttgactttttacgtcagttatcagcgcagttccagactaaggcaacttatattggtcaa
gagccggtcttggacagtatcggtaaattttcaaagaatatggaagcctattatgactac
agcgggaccatgatagacttgactccagcagaccaagaaaaaatccaactctgggaggtt
gttaaccaaaaagaagaagtggagcaagttgcgactgcaattcgtcagcatgtgcatcaa
ggtgctcgctataaagacatcttgttgctcttgggtgacgtggatagctacaagttgcag
attggcaagatttttgacaagtatgacattccttactatttcggtaaggcagaggagatg
agtcatcatccgttggtccattttgtggagtccttggagcgcttgcgtcgctatcgtttt
cgtgcggaagacctgctcaatctcctcaaatctggtttgtacgccagcatttcccaaaag
gagctggacctatttgagtcttacatcctttttgcggatatgaaggggcaggctgctttt
tcgagggctttttcggtcaatggcagagcagactatgatgctgaagtcatcaaggagaaa
aggcttgtctatgatttgactgtcttggaacccctacgtgctaagattatggaacctttg
aaccagctgtttaaggctggaccacaatctggaactgccttgcttgagaaatttatggca
tttttggaggcaattgatcttcctaaaaatatggaaaaaatgtctcgaaatttgagtgaa
gtagagcaagaaaaagaagagcaggtctggaaaagttttacccatcttcttgagaatttt
catcagattttcggaaaagaaaagttgaaaatggatgattttctggctattttacaggct
ggaatgcaggccagccactatcgtaccgttcctgcaacagttgatgtggtcaatgtcaaa
tcctatgatttgatcgagccgcacactgcaaagtatgtttatgctatcggaatgggtcag
tcaaattttccaaaagttgccaagaataccagtctattgacagaagaagagatggaaaaa
gtcaatcttgtctcggctagttcctcacgtttcgatttggtcagccgagagaatatcaag
aagaaccatgctgctatgatgtctctgcttaattctgcgacggaacagttagtcatttct
actcctcagatttataacgaaggcgaagatagtctctccccatatatcaagattctccaa
aaaatggggttgaaatccgaagaacgtggtcggattaaaacacttagtccacaagacatc
ggtcactacaagagtctcttatcccgtttgattgagtcggaaagaccaagccttgaaaca
gaggagtgggaagggcagagggccttctggacagtcttggttcgccatttgaagaagaaa
ttggagtcgcaaagcattgaaattccgaccattactggtgatattgcttctaaacaactt
tcagatgaaaccttggctgctttatatccagaggataagccgctcaatctttctgcatcc
agcttgaccaatttctacaataaccaatatctttactttgtccgtaatgttcttcgcctg
cgggaacaggaatccatccatccgactgcctttcagcatggtttgttcttgcatcggatt
tttgaacgagtggtcatggaccaatctgagctagattttgatcaaaaagtggacaaggca
attctgcgtacgcgtgacgaggcagaatttgctatgttttataaccaggatgcggatgct
cgttatacggaggaggtgctggataagattgctcgttccagtgcgactattttgcgggat
aatgatttggttgaaattgatggccaggaaaagagtttccgtcaggataaggcgctggtt
tttgaccttcaaaatggcaagagtgtgcatgtaaatggtaccattgaccgcttggatacc
ttacaaatcaatcaggctgtcggtgttgtggattacaagtccagcgaccaatctttttca
gttggggatttttataatggtctcaaacctcagttggtgacctacttggcagccttacaa
gagctggatgaaaccaaggataaacctgtttttggggctatgtatttgcatttgcaggat
ccgattatcaaattaaaagacacgaagaatttagaacagctagaaggagctgccaatact
agcttggtttacaaggggcttttcttgaaggaggaaagtctggggctcaatcatttttat
cagactcgtaaccaactctacacggaagatgagtttgcggttttattgaaccacaaccaa
gaactatacaaacaagctgccatggacattctggctggtcgctttgctattaacccttat
accaaagatgggcgttcggtggcaggtgagcagctgaaggcaatcactggttttgaggcg
gatcggcacatgggcatggcacggcggttggtcaaagaggccaagcgtcaagattggatg
gaacgaatgaaaggaggtcaggactaa
DBGET
integrated database retrieval system
