Streptococcus suis GZ1 (serotype 2): SSGZ1_0872
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Entry
SSGZ1_0872 CDS
T02023
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssw
Streptococcus suis GZ1 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssw03032
]
SSGZ1_0872
03400 DNA repair and recombination proteins [BR:
ssw03400
]
SSGZ1_0872
Enzymes [BR:
ssw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SSGZ1_0872
DNA replication proteins [BR:
ssw03032
]
Prokaryotic type
DNA Topoisomerases
SSGZ1_0872
DNA repair and recombination proteins [BR:
ssw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SSGZ1_0872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
phage_tail_N
HypA
Motif
Other DBs
NCBI-ProteinID:
ADE31329
UniProt:
D5AHL4
LinkDB
All DBs
Position
complement(914779..916872)
Genome browser
AA seq
697 aa
AA seq
DB search
MATKTVSKKKTTTKKNLVIVESPAKAKTIEKYLGKNYKVVASVGHIRDLKKSSMSIDFDN
NYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAISWHLAHILGLDANDKNRV
VFNEITKDAVKNAFQEPRAINHDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQ
SVALKLIIDRENEISNFKPEEYWTIDATFKKGSKKFQASFYGIDGKKTKIENNEQVKEIL
ARLDGDDFLVEQVERKERKRNAPLPYTTSTMQMDAANKINFRTRKTMMVAQQLYEGVSLG
TGGTQGLITYMRTDSTRISPVAQAQAADFITERFGATYSKHGNKVKNASGAQDAHEAIRP
SNVNLTPESIAKYLDKDQLRLYTLIWNRFVASQMAAAVFDTMSVRLGQNGVIFAANGSQV
KFDGYMAVYNDSDKNKMLPDMEQGDTVVRTSTNPEQHFTQPPARYSEATLIKTLEENGVG
RPSTYAPTIETIQKRYYVKLAAKRFEPTELGEIVNKLIVEFFPDIVNVKFTADMEQKLDD
VEIGKEQWQKVIDGFYQPFKVELFKAEEQMEKIQIKDEPAGFDCDVCGHEMVIKLGRFGK
FYACSNFPDCRNTKQITKEIGVTCPVCQQGQVIERKSKRNRLFYGCDRYPECEFTSWDKP
VGRACPKCDHYLVEKKVRGGGKQVVCPNGDYEEDKIK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaaacagttagtaagaaaaaaacaacaaccaagaaaaatctcgttattgta
gagtcacctgctaaggcaaaaacaatcgaaaaatatcttggtaaaaattataaggtcgtt
gcttcagtcgggcatattcgagatttgaagaaatctagtatgtctattgactttgataac
aactatgcacctgagtacatcaacatacgtggaaaaggaccactcatcaattctttgaaa
aaagaagcaaaaaatgctaagcaagtctttctcgcgagtgacccggaccgcgaaggagaa
gcaatttcttggcatttggctcacattttgggattggacgcaaacgataaaaaccgtgtt
gtctttaatgaaattacaaaagatgcagtaaaaaatgcttttcaggagccgcgcgctatc
aatcatgacttggtagatgcccagcaagctcgtcgcgtcttagaccgtattgtagggtac
tccatatcacctattttatggaagaaagtcaaaaaaggtctgtcagcaggacgtgttcaa
tcggttgctctcaaattaataatcgaccgtgaaaatgaaatcagcaatttcaaaccagaa
gaatattggacaattgatgcaaccttcaaaaaggggagcaagaaattccaggcttctttc
tacggtatagatggaaagaaaactaaaattgaaaacaatgagcaggttaaagaaattctc
gcccgacttgatggggatgatttcttagtagaacaggttgagcgtaaggaacgcaaacga
aatgcacctctgccttacacaacttctactatgcagatggatgcggctaataaaatcaat
ttccgtactcgtaaaaccatgatggttgcccaacaactttatgagggtgtcagtcttggc
acaggtggtacccaaggtttgattacctatatgcgtacggattcaacacgtattagccct
gttgcacaagcacaagctgctgactttatcacggagcgttttggtgctacctattcaaag
catggtaataaagtaaaaaatgccagtggtgcacaagatgcccacgaagccattcgtcca
tcaaatgttaacttaacacctgaatcaattgcaaaatatctggacaaggaccagttgcga
ctatatacactgatttggaatcgttttgtcgcaagtcagatggctgcagcggtctttgat
accatgagtgttcgtctaggtcaaaatggagtgatttttgctgccaatggtagccaagtt
aaatttgatggttacatggcagtctataatgattctgacaagaataagatgttgccagat
atggagcaaggtgatacagttgtacgtacatcaacaaatcctgaacaacattttacgcag
ccaccagctcgctattctgaagctactttgattaagactttggaagaaaatggtgttggt
cgtccgtcaacctatgcaccaaccattgaaaccattcagaaacgctactatgttaagtta
gctgctaagcgatttgaaccgactgaactcggcgaaatcgttaataagctgattgttgaa
ttcttcccagatattgtcaatgtcaaatttacagccgatatggaacaaaaattggatgat
gtagaaatcgggaaagagcagtggcagaaggtcattgatggtttctatcagccattcaag
gtagaattatttaaggcagaagaacagatggaaaaaatccaaattaaggatgaaccagct
ggctttgactgtgatgtttgtggacatgaaatggtcattaaactaggtcgttttggaaaa
ttctatgcttgtagtaatttccccgattgccgcaataccaagcaaattaccaaggagatc
ggcgtaacttgccccgtgtgtcaacaaggccaggtcattgaacgaaagagcaaacgcaat
cgacttttctatggttgtgaccgttatccagagtgtgaatttacctcatgggataaacct
gttggtcgtgcctgtccaaaatgtgaccactatcttgtcgagaaaaaagttcgtggtggt
ggtaaacaagttgtctgtccaaatggtgactacgaagaagacaagattaaataa
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