Streptococcus suis GZ1 (serotype 2): SSGZ1_1239
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Entry
SSGZ1_1239 CDS
T02023
Name
(GenBank) Formamidopyrimidine-DNA glycolase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ssw
Streptococcus suis GZ1 (serotype 2)
Pathway
ssw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSGZ1_1239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssw03400
]
SSGZ1_1239
Enzymes [BR:
ssw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SSGZ1_1239
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SSGZ1_1239
DNA repair and recombination proteins [BR:
ssw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SSGZ1_1239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
DUF4862
Zn_ribbon_6
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ADE31696
UniProt:
D5AIN1
LinkDB
All DBs
Position
complement(1289394..1290287)
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AA seq
297 aa
AA seq
DB search
MCKSHSVALLIFSRFLRSWYRKLPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGV
DAFCQDLIGQEILDVDRRGKYLLIYLTDHVLISHLRMEGKYNFFADQVPANKHFHAFFTF
IDGSTLVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIK
SHLLDQSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSTDQVADLRQATIEVLQLGIEKGGS
TIRTYKNALGMDGTMQDYLQVYGKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKHG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcaagtcacacagcgtcgctctcctaattttcagtcgctttttacgctcttggtat
cgtaaattgcccgaattgcctgaggttgagacggttcgtcgtggtttgaatcgtttggtc
aagggaaaagttatttccaaggtggaggtgacctatgctcccatgattaagacaggtgtg
gatgccttctgccaagacttgattggtcaggagattttagatgtggaccgtcgtggcaag
tatctcttgatttacctgacagaccatgtcctcatttctcatttgcggatggaaggtaag
tacaatttctttgctgaccaggtgcctgccaacaaacatttccatgccttttttactttt
atagatggctcgaccttggtctatcaagatgtccgcaagtttgggaccatggaactgctg
ggtaaggcagatgtggatgcctattttatcagtcgaaaaattggtcctgagccgacggag
gaagattttgacttagaagaatttgccaaaaagttagctaagtcgaaaaagcccattaag
tcgcatcttttggaccagtctttggtggctggtttgggcaatatttatgtcgatgaggtc
ttgttcaaggccaaagttcatcctgcacaaacgagtaatcagctgtcgacagatcaggtg
gcagacctccgtcaagccaccattgaagtcctgcaactgggtattgaaaaaggtggttca
accattcggacttacaaaaatgccttgggcatggatgggactatgcaggattatttacaa
gtttacggaaagacagggcaggcctgtccccgttgccagacagagattgtcaaaatccag
ctgggcggacgggggacacatttctgtcccaagtgtcaggtgaaacatggctaa
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integrated database retrieval system
