KEGG   Streptococcus suis GZ1 (serotype 2): SSGZ1_1645
Entry
SSGZ1_1645        CDS       T02023                                 
Name
(GenBank) Excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
ssw  Streptococcus suis GZ1 (serotype 2)
Pathway
ssw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SSGZ1_1645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssw03400]
    SSGZ1_1645
DNA repair and recombination proteins [BR:ssw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SSGZ1_1645
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SSGZ1_1645
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 AAA_29 RsgA_GTPase AAA_21 nSTAND3 AAA_22 BCA_ABC_TP_C AAA_33 AAA_25 AAA_23 ATPase NACHT AAA_14 Viral_helicase1 MMR_HSR1 cobW DUF87 NB-ARC AAA_24 DnaJ_CXXCXGXG NTPase_1 Septin MeaB T2SSE DUF463 IIGP RNA_pol_Rbc25
Other DBs
NCBI-ProteinID: ADE32101
UniProt: D5AJT6
LinkDB
Position
complement(1670522..1673347)
AA seq 941 aa
MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGNMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPY
CINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKKGQHKTIFEKIQKDGYVRVRV
NGGVYDVSEVPELSKSKAHNIEVVVDRIVIKDGIRSRLFDSIEAALRIADGYVIIDTMDE
KEMLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGMKLEVDTDLIVPDASKTL
REGALAPWNPISSNYYPQMLEQAMNHFGVDMDKPFEELTEEEKNLIFNGSDGKEFHFHYE
NEFGGVRDIDIPFEGLITNINRRYRETNSDYTRTVMKTYMNELTCGTCHGYRLNDQALSV
KVGGEQGLHIGQLSDLSVADHLQVIEHLTLSENEATIATPIVKEIKDRLSFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLG
NTLIVVEHDEDTMREADWLIDIGPGAGVFGGEIVASGTPAQVAKNKKSITGQYLSGKREI
PVPLERRVGNGRFLEVTGAKENNLQDVTVRFPLGKFVAVTGVSGSGKSTLVNSILKKAIA
QKLNRNSDKPGKFKSISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHY
KEKNIAQVLDMTVNDAVEFFKHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVDDGNTVLVIEHNLDVIKTADH
IIDMGPEGGVGGGTVVATGTPEEVAENPASFTGQYLKMKLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgcaagaaaatattgtgattcatggggcgcgtgcccataatttgaaaaatattgatgtg
accattccgcgtgagaagctggtggtggtgactggtttgtcggggtctggtaagtcgagt
ttggctttcgataccttgtatgccgagggtcaacgtcgctatgtggagtctttgtctgcc
tatgctcgtcagttcttgggcaacatggacaagcctgatgtggattccatagagggtctc
agccctgctatttccattgaccaaaaaaccacatcgcggaatccgcgttcgacagtcggt
acagcgacggaaatcaatgactatctccgcttgctttatgctcgggttggggtaccttac
tgtatcaatggccacggagcgattgcggcttcttcggtggaacaaatcgttgatgaggtc
ttggaattgccagaacgccaacgtttgcagattctagctccgattgttcgtaagaaaaag
gggcaacacaagaccatttttgagaaaatccagaaggacggctatgttcgggtacgtgtc
aatggcggtgtctatgatgtgtcggaagtaccagaattgtccaagagcaaggctcataat
attgaagttgtggtcgatcggattgtgatcaaagatggcattcgctcgcggctttttgac
tccattgaggcggccctgcggattgcggacggctatgtcatcatcgacaccatggatgag
aaggaaatgcttttctctgagtactatgcctgcccagtttgtggttttacggtaccagag
ttggagcctcgcctcttctctttcaatgctccttttgggtcttgtagcgactgtgacggt
ttgggcatgaagctggaagtggatacggatttgattgtcccagatgccagcaagaccttg
cgtgaaggtgccttggctccttggaatccaatctcatccaactactatcctcagatgttg
gagcaggccatgaatcactttggtgtggacatggacaagccttttgaggaattgacggaa
gaggagaagaacctgattttcaacggttctgacgggaaagaattccatttccattatgaa
aatgagttcggtggagtccgagatattgacattccattcgagggcttgattaccaacatt
aatcgccgctatcgtgaaaccaatagtgattacacacggacagtcatgaagacttacatg
aatgaactgacctgtgggacctgccacggctatcgcctcaatgaccaagccctgtctgtc
aaagtcggaggcgagcagggacttcatatcggacaattatcagacttgtccgtggcggat
catttgcaagtcattgaacatctgaccttgtctgaaaatgaagccaccattgcaacaccc
attgtcaaggaaatcaaggatcgcctgtccttcctaaataacgttggtctcaactatctg
actctttcacgagcagcaggtaccctttctggtggtgagagccagcggattcgtctggcg
actcagattggctctaacctgtctggtgtcctctatattctggatgagccgtcgattggt
ctgcaccagcgggacaatgaccgtctgattgctagtcttaagaaaatgcgtgatttgggc
aatacattgattgtggtggagcatgatgaggacactatgcgtgaggcggactggttgatt
gacatcggtccaggtgcgggtgtgtttggcggagaaatcgtggcctctggcacaccagcc
caagtagctaaaaacaagaaatccattacaggccagtacctgtctggcaaacgtgaaatt
ccagttcctttggaacgtcgtgttggaaatggtcgattcttagaggtgaccggtgccaag
gaaaacaacctgcaagatgtgactgttcgtttcccactcggaaaatttgtagcggtgaca
ggggtgtctggctcaggtaagtcaactctggtcaattccattctgaaaaaagctattgct
cagaaactcaatcgcaattcggacaagccaggtaagttcaagtctatttcaggaattgaa
cacttggaccgcctgattgatattgaccaaagcccgattggacggacaccacgttctaac
ccagctacctacacaggtgtctttgacgatattcgggatttgtttgcccagaccaatgaa
gccaagattcgtggctacaagaagggccgtttctcctttaacgtcaaaggtggacggtgt
gaggcttgttctggtgatgggattatcaagattgaaatgcacttcctgcccgatgtcttt
gtaccttgtgaagtctgtcatggacaccgctataattctgaaaccttggaagtacactac
aaggagaaaaatatcgctcaggtccttgatatgacggtcaatgacgcggtcgagttcttc
aagcatattccaaaaattgagcggaaacttcgtactattcaagatgtaggtttgggctac
gttactctaggtcagccagcaacgaccctatcaggtggggaagcccagcgtatgaagttg
gcttctgaactccacaagcggtcaactggtaaatccttgtatatcttggatgagccgacg
acaggtctgcatacggaggacattgcccagttgctcaaggtcttggctcgctttgttgat
gatggcaataccgtgctggtcatcgagcacaatctggatgttatcaagacagccgaccac
attatcgacatgggaccggaaggcggtgtcggtggcggtaccgttgtcgcgacaggaaca
ccagaagaagtggcggagaacccagccagctttacaggccagtatctgaaaatgaagttg
aaataa

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