Streptomyces sp. SirexAA-E: SACTE_0341
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Entry
SACTE_0341 CDS
T01601
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ssx
Streptomyces sp. SirexAA-E
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssx03021
]
SACTE_0341
Transcription machinery [BR:
ssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SACTE_0341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
GerE
HTH_37
HTH_23
HTH_3
HTH_38
HTH_31
HTH_AraC
Sigma70_ECF
KORA
Motif
Other DBs
NCBI-ProteinID:
AEN08285
UniProt:
G2NB84
LinkDB
All DBs
Position
376180..377052
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AA seq
290 aa
AA seq
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MTAHTARTAAAERAGAAGDLPWIEDAGQVAPRDARQLSKLFFDRLQLLDEGTPEHQYARN
TLIEMNLSLVRFAAGRFRSRGSGDMEDIVQVGTVGLIKAIDRFDLAREVEFTSFAVPYIV
GEIKRFFRDTTWSVHVPRRLQELRVDLARAKETLAVGLDRDPTVQELAAHLGLDEQEVTD
GIVAANGYTAGSLDMPAEAGDPAGRATGGRTFADVLGEPDPAMETVENLHALAPLLEDLD
ARERRIIEMRFGQELTQAQIGDELGISQMHVSRLLGRTLRKLRAGMFTED
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcacacggcacggaccgccgctgcggaacgggcgggcgccgcaggagacctg
ccgtggatcgaggacgcgggacaggtcgcgccgcgggacgcacggcagttgtcgaagctg
ttcttcgaccggctccagctgctcgacgagggcacgccggagcaccagtacgccaggaac
acgctcatcgagatgaacctctccctggtgcggttcgcggccggccgcttccgcagccgg
ggcagcggcgacatggaggacatcgtccaggtcggcaccgtcggcctgatcaaggcgatc
gaccggttcgacctggcccgcgaggtcgagttcacctcgttcgccgtgccgtacatcgtg
ggtgagatcaagcgcttcttccgcgacaccacatggtccgtccatgtaccgcgacggctc
caggaactgcgggtggacctcgcccgggcgaaggagacgctcgccgtcggcctggaccgg
gaccccacggtccaggagctcgccgcccacctcggcctcgacgagcaggaggtcacggac
gggatcgtcgcggccaacggctacacggcgggctcactcgacatgcccgcggaagcgggc
gaccccgcgggccgcgcgacgggcgggcgcaccttcgccgatgtgctgggcgagcccgac
ccggcgatggagacggtggagaacctccacgccctggcgccgctgctggaggatctcgac
gcacgggagcgccgcatcatagagatgcggttcggccaggagctgacacaggctcagatc
ggggacgagctggggatctcccagatgcatgtgtcccggctgctcggccggacgctccgc
aagctgcgcgccgggatgttcaccgaggactga
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