Streptomyces sp. SirexAA-E: SACTE_1493
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Entry
SACTE_1493 CDS
T01601
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssx
Streptomyces sp. SirexAA-E
Pathway
ssx03030
DNA replication
ssx03430
Mismatch repair
ssx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SACTE_1493
03430 Mismatch repair
SACTE_1493
03440 Homologous recombination
SACTE_1493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssx03032
]
SACTE_1493
03400 DNA repair and recombination proteins [BR:
ssx03400
]
SACTE_1493
Enzymes [BR:
ssx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SACTE_1493
DNA replication proteins [BR:
ssx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SACTE_1493
DNA repair and recombination proteins [BR:
ssx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SACTE_1493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
AEN09410
UniProt:
G2NBM9
LinkDB
All DBs
Position
complement(1668846..1672385)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFEAANTMGMSHIAMTDHGNLHGAYDFFHSAQKA
GVTPIIGIEAYVAPESRKHKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGEVQTRLRLGQFDEAVQAASDYKD
IFGEGRYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKTTDEMYAVDSSDAWQEGCANTLLVAQQIDTTGMFEKRD
LMPKFEIPDGFTEVTWFQEEVRVGMARRYPGGVPEDRQKQAEYEMDIIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPITHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLSGITDPKHPRYGEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPVWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKA
NKGIDLEMLALPLDDPKTYELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLKETLGLTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLFQAGAKKNGYSDAAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLTAVRNVGQNVVDSIIRCRKAKGKYSTFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMGHTRKGLVAHHEPMIDNVVQVKRKEAEGQFDLFGGMGEEESDEPGFGL
DVEFSDIEWEKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKSDASISQLTGGEHADGAIV
TVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDVPRLVAMEMQVPDISNAGTNAPVVLTIPTVRVTPPMVSRLGEVLGNHRGDTEVRI
RLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgaggcggcgaacacgatgggcatgtcgcacatcgcc
atgaccgaccacggcaacctccacggcgcctacgacttcttccactcggcccagaaggcc
ggggtcacgccgatcatcgggatcgaggcgtacgtcgcccccgagtcgcgcaagcacaag
cggaagatccagtggggccagccgcaccagaagcgcgacgacgtctccggctcgggtggt
tacacccacaagacgatctgggcggcgaacagcaccggtctgcacaacctcttcaagctc
tcctcggacgcgtacgccgagggctggctgcagaagtggccgcgcatggacaaggagacc
atctcccagtggtccgagggcctgatcgcctccaccgggtgcccctccggcgaggtgcag
acccggctgcgcctcgggcagttcgacgaggccgtccaggcggcctccgactacaaggac
atcttcggtgagggcaggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacgggctgctggagatcggcaggaagctgggcatcccgccgctcgtgacg
aacgactcgcactacacgtacgcccacgaggccaccgcgcacgacgccctgctctgcatc
cagaccggcaagaacctctccgaccccgaccgcttccgcttcgacggcaccggctactac
ctcaagacgacggacgagatgtacgccgtcgactcctccgacgcctggcaggagggctgc
gccaacaccctcctggtcgcgcagcagatcgacaccaccggcatgttcgagaagcgcgac
ctcatgccgaagttcgagatcccggacggtttcaccgaggtcacctggttccaggaggag
gtccgggtcggcatggcccgccgctaccccggcggtgtccccgaggaccggcagaagcag
gccgagtacgagatggacatcatcatccagatggggttcccggggtacttcctcgtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggttcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcacccac
ggactgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccggtacgtcaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaaggac
tccgcccgcgtcctcggctacccctacgcgatgggggaccggctgaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcagcggcatcaccgaccccaagcacccgcgc
tacggcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgaggggctcgtccggcagatgggcgtgcacgcggcaggc
gtgatcatgtccagcgaacccatcgtcgaccacgccccggtctgggtgcggcacaccgac
ggcgtcaccatcacgcagtgggactacccccagtgcgagtcgctcggcctgctcaagatg
gacttcctgggcctgcgcaacctgacgatcatggacgacgccatcaagatggtgaaggcc
aacaagggcatcgacctggagatgctcgccctgccgctggacgaccccaagacctacgaa
ctgctctgccgcggtgacacgctcggggtgttccagttcgacggcggccccatgcgctcg
ctgctgcgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacacgaactacgccgagcgcaagaacggccgc
caggagatcaccccgatccacccggagctggaggagccgctcaaggagacgctcggcctg
acctacggcctcatcgtctaccaggagcaggtccagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggaa
ctggcgaagaacttcgtcctcttccaggccggcgccaagaagaacggctactcggacgcg
gcgatccaggcgctctgggacgtgctggtgcccttcgccggctacgcgttcaacaaggcg
cactcctcggcgtacgggctggtcacctactggaccgcctacctcaaggccaactacccg
gccgagtacatggcggcgctgctgacctccgtcaaggacgacaaggacaagtcggcggtc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgccgaacgtcaacgagtcg
gagtccaacttcgccgcccagggtgacgacgtgatcctcttcgggctcaccgccgtccgc
aacgtcgggcagaacgtcgtggactcgatcatccggtgccgcaaggccaaggggaagtac
tccaccttcccggacttcctggacaaggtcgaggcggtcgtctgcaacaagcgcaccgtc
gaatcgctcatcaaggcgggcgccttcgacgagatgggccacacccgcaagggcctggtc
gcccaccacgagccgatgatcgacaacgtggtgcaggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgaggaggagagcgacgagccgggcttcgggctc
gacgtcgagttctccgacatcgagtgggagaagtcctacctgctcgcccaggagcgggag
atgctcggcctgtacgtctccgaccacccgctcttcgggctggagcacgtgctctccgac
aagtcggacgcctcgatctcccagctcaccggcggcgagcacgccgacggcgcgatcgtc
accgtcggcggcatcatctcgggtctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctcgcgggctccatcgagtgcatgttcttccccgccacc
taccagctggtctccacccagctcgtcgaggacaccgtcgtcttcgtcaaggggcgcctc
gacaagcgggaggacgtgccgcgcctggtcgccatggagatgcaggttcccgacatctcc
aacgccgggaccaacgcgccggtcgtgctgaccatccccacggtccgggtcacgccgccc
atggtgagccggctcggcgaggtcctcggcaaccaccggggcgacaccgaggtccgcatc
aggctccagggcccccgcaagaccaccgtcctcaggctcgaccggcaccgcgtcaagccc
gacccggcgctcttcggtgacctgaaggtgctgctcggaccgtcctgcctggccggctga
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integrated database retrieval system
