Streptomyces sp. SirexAA-E: SACTE_2751
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Entry
SACTE_2751 CDS
T01601
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ssx
Streptomyces sp. SirexAA-E
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssx03016
]
SACTE_2751
Enzymes [BR:
ssx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SACTE_2751
Transfer RNA biogenesis [BR:
ssx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SACTE_2751
Prokaryotic type
tRNA splicing ligases
SACTE_2751
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AEN10634
LinkDB
All DBs
Position
complement(3093710..3094903)
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AA seq
397 aa
AA seq
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MSYVEVPGAKVPIRMWADPASVEDVAMRQLRNVATLPWIKGLAVMPDVHFGKGATVGSVI
AMHGAVCPAAVGVDIGCGMSAVKTSLTAGDLPGDLSRLRSKIEQAIPVGRGMHDGMVDPG
KLHGFPTTGWDDFWSRFDGVADAVKFRQDRATKQMGTLGSGNHFIEFCLDEAGAVWLMLH
SGSRNIGKELADFHIGQAQKLPHNQGLVDRDLAVFIADTPQMAAYRNDLFWAQEYAKYNR
AIMMGLFQDVVRKEFKKAKVTFAPVISCHHNYVAEERYDGMDLLVTRKGAIRAGSGDFGI
IPGSMGTGSYIVKGLGNAKSFNSASHGAGRRMSRNAAKRAFSTKDLEDQTRGVECRKDSG
VVDEIPAAYKPIEQVIDRQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtagaggtgccgggggcgaaggtccccatccggatgtgggcggaccctgcg
tccgtcgaggacgtcgcgatgcggcagctgcggaacgtggcgacgctgccgtggatcaag
ggcctcgcggtcatgccggacgtccacttcggcaagggcgccaccgtcggctcggtgatc
gcgatgcacggcgcggtctgcccggccgcggtgggtgtggacatcggctgcgggatgtcc
gcggtcaagacctcgctgacggccggcgacctgccgggggacctctcacggctgcggtcg
aagatcgagcaggccatcccggtgggacgggggatgcacgacggcatggtggaccccggc
aagctgcacggcttcccgaccacgggctgggacgacttctggtcgcggttcgacggggtc
gccgacgcggtcaagttccgtcaggaccgtgccaccaagcagatggggacgctcggatcg
ggcaaccacttcatcgagttctgcctcgacgaggcgggcgccgtctggctgatgctgcac
tccgggtcccggaacatcggcaaggagctcgccgacttccacatcggacaggcccagaag
ctcccgcacaaccagggcctcgtcgaccgtgacctggcggtcttcatcgccgacaccccg
cagatggccgcgtaccgcaacgacctcttctgggcgcaggagtacgccaagtacaaccgc
gcgatcatgatggggctcttccaggacgtggtccgcaaggagttcaagaaggcgaaggtc
accttcgccccggtcatctcctgccaccacaactacgtggcggaggagcggtacgacggt
atggacctgctggtcacccgcaagggcgcgatccgggccggctccggggacttcggcatc
atcccgggctccatgggcacgggttcgtacatcgtgaagggcctcggcaacgcgaagtcg
ttcaactcggcctcgcacggcgcgggccggaggatgagccggaacgcggcgaagcgggcg
ttctccacgaaggacctggaggaccagacgcggggcgtggagtgccgtaaggactccggc
gtggtggacgagatcccggccgcgtacaagccgatcgagcaggtcatcgaccggcagcgg
gacctggtcgaggtcgtggccaagctcaagcaggtcgtctgtgtgaagggctga
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