Streptomyces sp. SirexAA-E: SACTE_3431
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Entry
SACTE_3431 CDS
T01601
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ssx
Streptomyces sp. SirexAA-E
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssx03021
]
SACTE_3431
Transcription machinery [BR:
ssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SACTE_3431
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
HTH_24
Sigma70_ECF
MarR
HTH_31
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AEN11289
UniProt:
G2NLI0
LinkDB
All DBs
Position
complement(3832576..3833442)
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AA seq
288 aa
AA seq
DB search
MSVDQGSSKVLTLTKSAPAPAVLTSSSEAIDTRTLSRSLFLRLAALGPASGPDGTDSPER
AYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAM
PTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELAQKLDRSPTVPELAKALGVSEE
DVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDAALEGVEYRESLKPLLAKLPP
RERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLTQLREGLIAD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaccagggcagctcgaaggtgctcacgctcacgaagagcgcgcccgcacct
gccgtgctcaccagctcgtcggaagccatcgacacccgtacgctgtcccgctccctgttc
ctgcggctcgccgctctgggacccgcctcgggacccgacgggacggacagcccggagcgg
gcctacgtccgggacacactcatcgagctcaacctcccgctcgtgcgctacgcggcggca
cggttccgcagccgtaacgagcccatggaggacatcgtccaggtcggcacgatcggcctg
atcaaggcgatcgaccgcttcgactgcgagcggggcgtggagttccccaccttcgccatg
ccgaccgtcgtgggggagatcaagcgcttcttccgcgacacctcgtggtcggtgcgggtg
ccgcgccggctccaggagctgcgcctggcgctcaccaaggcgagcgacgagctcgcccag
aagctcgaccgttcgccgacggtcccggagctggccaaggcgctgggcgtctccgaggag
gacgtggtcgacgggctggccgtcggcaacgcctacacggcctcctcgctggactccccc
tccccggaggacgacggcggcgagggctcgctggcggaccgtctggggtacgaggacgcg
gccctggagggcgtcgagtaccgcgagtcgctcaagccgctgctggccaagctgccgccc
cgcgagcggcagatcatcatgctgcgcttcttcgccaacatgacccagtcgcagatcggc
gaggaggtcggcatctcgcagatgcacgtctctcggctgctgacccggacgctcacccag
ctccgggagggcctgatcgcggactga
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