Streptomyces sp. SirexAA-E: SACTE_3432
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Entry
SACTE_3432 CDS
T01601
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ssx
Streptomyces sp. SirexAA-E
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssx03021
]
SACTE_3432
Transcription machinery [BR:
ssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SACTE_3432
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
HTH_Crp_2
MarR
HTH_3
DUF134
HTH_5
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AEN11290
UniProt:
G2NLI1
LinkDB
All DBs
Position
complement(3833677..3834534)
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AA seq
285 aa
AA seq
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MPASTAPQVPPQNVQTDDIQTETPEPSAPGRTRGADTRALTQVLFGRLKDLEPGTPEHDR
VRTALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPERGVQFPTFAMPT
VVGEIKRYFRDNVRTVHVPRRLHELWVQVTGATEDLTTAHGRSPTTAEIAQRLKISEEEV
LACIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQR
ILLLRYYNNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtacagcgcctcaagtcccgccccagaacgtccagaccgacgacatccag
accgagacccccgaaccctccgcgcccggcaggacccggggcgcggacaccagggcgctc
acccaggtgctcttcggccgtctcaaggacctcgaaccgggcacccccgagcacgacagg
gtgcgcaccgccctgatcgaggcgaacctgccgctggtgcggtacgccgcggcccgtttc
cgcagccgcaacgagccgatggaagacgtcgtccaggtcggcaccatcggcctcatcaac
gctatcgaccgcttcgacccggaacgcggcgtgcagttcccgacgttcgccatgcccacc
gtggtcggcgagatcaagcgctacttccgggacaacgtgcgcaccgtgcacgtgccgcgc
cggctgcacgaactgtgggtccaggtcaccggtgccaccgaggacctgacgaccgctcac
ggacgctcgcccacgaccgccgagatcgcccagcggctgaagatctccgaggaggaggtc
ctcgcctgcatcgaggcgggccgctcctaccacgcgacctcgctggaggcggcgcaggag
ggcgacgggctgcccggcctgctggaccggctcggctacgaggacccggcgctggccggg
gtcgaacaccgcgacctggtacggcatctgctcgtccagctccccgagcgggagcagcgg
atcctgctgctgcgctactacaacaacctgacgcagtcacagatcagcgccgaactgggt
gtctcccagatgcacgtgtcaagacttctggccagaagcttcgcccgcctgaggtccgca
aacaggatcgaggcgtaa
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