Streptomyces sp. SirexAA-E: SACTE_3995
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Entry
SACTE_3995 CDS
T01601
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssx
Streptomyces sp. SirexAA-E
Pathway
ssx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SACTE_3995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssx03021
]
SACTE_3995
03400 DNA repair and recombination proteins [BR:
ssx03400
]
SACTE_3995
Enzymes [BR:
ssx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SACTE_3995
Transcription machinery [BR:
ssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SACTE_3995
DNA repair and recombination proteins [BR:
ssx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SACTE_3995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AEN11838
UniProt:
G2ND86
LinkDB
All DBs
Position
4419960..4420982
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AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccgtcgctgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggtaactccctgcgtcgt
accctcctctcctcgatccccggtgccgctgtcaccagcatccggatcgacggcgtcctg
cacgagttcaccaccgtgccgggtgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtcaccgccgcggacatcgcgccgccggccggtgtcgaggtgcacaac
ccggacctggtcctcgccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactccatctactcgccggtgctcaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgtgacgccatggcgtcggccggcaagaccctggtcgagctgttcggc
ctggcgcgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgcgctcgccgccgatctggcgctgccgatcgaggagctcgagctcacggtccgttcg
tacaactgcctcaagcgcgagggcatccactcggtgggcgagctcgtcgcccgctccgag
gcggacctgctcgacatccgcaacttcggcgccaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggcgctcaaggacagcccgcccggattcgacccgaccgccgcc
gcggacgccttcggcgcggacgacgacgcggacgccggtttcgtggagaccgagcagtac
tga
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