Streptomyces sp. SirexAA-E: SACTE_4662
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Entry
SACTE_4662 CDS
T01601
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ssx
Streptomyces sp. SirexAA-E
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssx03021
]
SACTE_4662
Transcription machinery [BR:
ssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SACTE_4662
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_23
DUF7343
HTH_3
HTH_37
KORA
GerE
NirdL-like_HTH
HTH_AraC
Sigma70_ECF
VASP_tetra
Motif
Other DBs
NCBI-ProteinID:
AEN12489
UniProt:
G2NQU8
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All DBs
Position
5160411..5161301
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AA seq
296 aa
AA seq
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MSLISERAAETTASDEVSAPDGGAASVGELPWIEDAGKIAPKDARELSTLFFAQLQVLEE
GTHEYQYARNTLIEMNISLVRFAARRFRNRGSGDMEDITQVGIVGLIKAIDRFELSREVE
FATFAVPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAKEELAVRLDRDPTVKELAEY
LGLTEDEVVEGIVASNGYTAGSLDLPTDANEATATATRTFADILGEPDAAMETVENLHAL
APLLEELDDRERRIIEMRFGQEMTQAQIGAELGISQMHVSRLLSRTLGKLRTGMFA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgatctccgaacgggccgctgagaccacggcgagtgacgaggtgtcggctccg
gacggcggggcggcatccgtcggtgagctgccctggatcgaggacgccgggaagatcgcc
cccaaggacgcccgcgagctgtccacactgttcttcgcccagctccaggttctggaggag
ggcacgcacgagtaccagtacgcgcggaacaccctcatcgagatgaacatctccctggtg
cggttcgccgcgcgccgcttccgcaaccggggcagcggcgacatggaggacatcacccag
gtcggcatcgtcggcctgatcaaggcgatcgaccggttcgagctctcccgtgaggtcgag
ttcgccaccttcgccgtcccctacatcgtcggggagatcaaacgattcttccgtgacacc
acctgggccgtccacgtgccccgccgcctccaggaactccgcgtggagctcgcgaaggcc
aaggaggagctcgccgtacgcctggaccgcgaccccacggtgaaggaactggccgagtac
ctgggcctcaccgaggacgaggtggtcgagggcatcgtggcctccaacgggtacacggcg
ggctcgctcgacctgccgaccgacgccaacgaggcgacggccacggcgacccgtacgttc
gccgacatcctgggtgagccggacgccgccatggagaccgtggagaacctgcacgcgctg
gccccgctcctggaggagctcgacgaccgcgaacggcgcatcatcgagatgcgcttcggc
caggagatgacccaggcgcagatcggcgccgagctcggcatctcccagatgcacgtctcc
cgtctcctcagccgcaccctcggcaagctacgcaccggcatgttcgcctga
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