Streptomyces sp. SirexAA-E: SACTE_4824
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Entry
SACTE_4824 CDS
T01601
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K02405
RNA polymerase sigma factor FliA
Organism
ssx
Streptomyces sp. SirexAA-E
Pathway
ssx02020
Two-component system
ssx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SACTE_4824
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SACTE_4824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssx03021
]
SACTE_4824
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ssx02035
]
SACTE_4824
Transcription machinery [BR:
ssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SACTE_4824
Bacterial motility proteins [BR:
ssx02035
]
Flagellar system
Flagellar assembly proteins
Stator
SACTE_4824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AEN12650
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Position
5344233..5345069
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AA seq
278 aa
AA seq
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MPQHTSGSDRAAVPPAARGTVRPPAPSSLDELWRSYKSTGDERLREQLILHYSPLVKYVA
GRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDLERAIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARNVERAYATLEAQLRRTPTEAEVAAEMGIALEELHSVFSQLSLANVVALEE
LLHVGGEGGDRLSLMDTLEDTAADNPVEIAEDRELRRMLARAINTLPEREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADAGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgaccgcgcggcagtaccaccggctgcgcgtggcact
gtgcgccctcctgccccctcctcgctcgacgagttgtggcgttcctacaagtcgacgggt
gacgagcggctgcgggagcagctgatcctgcactactcgcccctggtgaagtacgtcgcc
ggccgggtcagtgtggggctgccgtccaacgtggagcaggcggacttcgtctcctccggg
gtcttcggactgatcgacgccatcgagaagttcgacctcgaacgcgccatcaagttcgag
acgtacgcgatcacccggatccgtggggcgatgatcgacgaactccgggccctggactgg
atcccccggtccgtgcgtcagaaggcacgcaacgtcgaacgcgcctacgccacgctggag
gcgcagctgcggcgcaccccgacggaggccgaggtcgccgccgagatggggatcgccctg
gaggaactgcactccgttttcagccagttgtcgctggccaacgtggtggcgctggaggag
ctgctgcatgtcggcggggagggcggtgaccggctgagcctgatggacacccttgaggac
accgcggccgacaacccggtcgagatcgctgaggaccgggaactcagacggatgctcgcc
cgcgccatcaacacactcccggagcgcgagaagaccgtcgtcaccctctactactacgag
ggcctcaccctcgccgagatcggcaacgtcctcggtgtcaccgagagcagggtcagccag
atccacaccaagtcggtgctccagctccgggcgaagctggccgacgccggacgctga
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