Streptomyces sp. SirexAA-E: SACTE_5636
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Entry
SACTE_5636 CDS
T01601
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ssx
Streptomyces sp. SirexAA-E
Pathway
ssx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SACTE_5636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssx03000
]
SACTE_5636
03400 DNA repair and recombination proteins [BR:
ssx03400
]
SACTE_5636
Enzymes [BR:
ssx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SACTE_5636
Transcription factors [BR:
ssx03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SACTE_5636
DNA repair and recombination proteins [BR:
ssx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SACTE_5636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AEN13426
UniProt:
G2NMQ6
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All DBs
Position
6397731..6399203
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AA seq
490 aa
AA seq
DB search
MHTDTDRCVRAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKVRNMAFYPSAAACQQA
GFRACKRCRPDTSPGSPEWNVRADSVARAMRLIQDGVVDREGVPGLAARLGYSARQIERQ
LLAELGAGPLALARAQRAQTARVLIETTALPMAEVALAAGFSSIRTFNDTVREVFALTPG
ELRTRAARGAGTPHTPGVIALRLPYRAPLRPGNLFGHLAATAVPGVEEWRDGAYRRTLTL
PHGHGIVALSPQPGHIACRLSLTDPRDLTQAISRCRRLLDLDADPVAVDEELRADPLLAP
LVEAAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAARLVAAHGVPVEDPEGGLTHLF
PAPDALAGLDPEALALPRSRRATLTTLVAALADGSLRLGEGTDRDEARAGLSALPGFGPW
TVEVIAMRALGDPDAFLPTDLGIRKAARHLGLPSTPAALTARATRWRPWRAYAVQYLWTV
DDHPINHLPA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgatcgctgcgtgcgggccgtccggtccaaggacgcccggttcgac
ggctggttcttcaccgccgtcctgaccacccggatctactgccggcccagctgccccgtc
gtgccgcccaaggtccgcaacatggccttctaccccagcgcggccgcctgccagcaggcc
ggattccgggcctgcaagcggtgccgccccgacacgagccccggatcgccggagtggaac
gtccgcgccgactccgtcgcccgggccatgcgcctcatccaggacggcgtcgtcgaccgg
gagggcgtgcccggcctcgccgcgcggctcggctactcggcccggcagatcgagcgccag
ctcctggccgagctgggcgccggccctctcgcactggcccgtgcccagcgtgcccagacg
gcccgcgtcctcatcgagacgacggcgctcccgatggccgaggtcgcgctcgccgccgga
ttctcctccatccgcacgttcaacgacaccgtgcgcgaggtgttcgccctgacaccgggg
gagctgcgcaccagggccgcccggggtgccggtacgccgcacaccccgggcgtgatcgcc
ctgcggctgccctaccgggccccgctccggcccggcaacctcttcgggcacctcgccgcg
accgccgtccccggcgtcgaggagtggcgtgacggcgcctaccgccggacgctcaccctg
ccgcacggacacggcatcgtggcgctctccccgcagcccggccacatcgcctgccggctc
tccctcaccgacccccgcgacctcacccaggccatcagccggtgccgcagactgctcgac
ctcgacgccgatccggtcgccgtcgacgaggagctgcgggccgacccgctgctcgccccg
ctcgtcgaggcggcccccggacggagggtgccgaggacggtcgacgcggcggagttcgcc
gtacgcgcggtgctcggccagcaggtgtccacggccgccgcccgcacccacgcggcccgg
ctcgtcgccgcccacggggtgccggtcgaggacccggagggcggactcacccacctcttc
ccggcccccgacgcgctggccggactcgaccccgaggcgctcgccctgccccgcagccgc
cgcgccacactcaccaccctggtggccgccctcgcggacgggtccctgaggctgggcgag
ggcaccgaccgggacgaggcccgggccgggctgagcgccctgcccggattcggaccctgg
accgtcgaggtcatcgcgatgcgcgccctcggcgacccggacgccttcctccccaccgac
ctcgggatccgcaaggcggcccggcacctcggcctcccgtcgaccccggcggccctcacc
gcgcgcgccacgcggtggcgcccctggcgcgcgtacgccgtgcagtacctgtggaccgtc
gacgaccatcccatcaaccacctgcccgcctga
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