Streptomyces sp. SirexAA-E: SACTE_5978
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Entry
SACTE_5978 CDS
T01601
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ssx
Streptomyces sp. SirexAA-E
Pathway
ssx00040
Pentose and glucuronate interconversions
ssx01100
Metabolic pathways
ssx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SACTE_5978
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SACTE_5978
Enzymes [BR:
ssx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SACTE_5978
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
AEN13760
UniProt:
G2NJV1
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All DBs
Position
complement(6792829..6794373)
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AA seq
514 aa
AA seq
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MRRPVALRLSAAGATLALAAATGALMAMPEAASAATGGVTGYATQNGGTTGGAGGQTVRA
TTGTAIHAALCGRASSSTPLTIQVEGTINHGNTDKVSGSSCNTAAGVIELKQISNVTIVG
VGGGAVFDQVGIHVRESSNIIIQNVTVKNVKKSGSPTSNGGDAIGMEKDVRNVWVDHTTL
EASGGESEGFDGLFDMKAGTQYVTLSYSILRNSGRGGLVGSSESDLSNGFITYHHNLYEN
IDSRAPLLRGGVAHIYNNHYVGLSKSGINSRAGARAKVDNNYFEDSKDVLGTFYTDAAGY
WQVSGNVFDNVTWSGRSSDNNPAGPDPQSNTSVSIPYAYTLDGANCVPSVVSRTAGANTG
LKVSDGSCSPQTPDPTDPTPDPTPDPTDPTPPTGTNLSLGAGSDGSSKASGTSYGDVRDG
DMSTYWSPSGSTGSVSIKWSSATTVSKINVREAAGSTGSITSWKVGNADTGAVLASGSGA
GVITFPQTSLRKITFEITGSTGTPKVAEFETYAG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaccagtcgccctgcgactcagcgcggcgggggccaccctggccctggctgcc
gcgaccggcgcactgatggcgatgcccgaggcggcgtcggcagcgaccggcggcgtcacc
ggatacgcgacccagaacggcggcaccaccggcggcgccggcgggcagacggtgcgggcc
accaccgggaccgcgatccacgccgccctgtgcgggcgggccagcagctccaccccgctc
accatccaggtcgaggggaccatcaaccacggcaacaccgacaaggtctcgggcagcagc
tgcaacaccgccgccggagtcatcgagctgaagcagatcagcaacgtcacgatcgtcggc
gtgggcggcggcgccgtcttcgaccaagtaggcatccacgtccgcgagtccagcaacatc
atcatccagaacgtcaccgtcaagaacgtcaagaagtccggctcgcccacgtccaacggc
ggtgacgccatcggcatggagaaggacgtccgcaacgtctgggtggaccacaccaccctg
gaggcctcgggcggcgagtcggagggcttcgacggcctcttcgacatgaaggccggcacc
cagtacgtgacgctgtcctacagcatcctgcgcaactccggccggggaggcctcgtcggc
tccagcgagagcgacctctcgaacggcttcatcacctaccaccacaacctgtacgagaac
atcgactcccgcgcccctctgctgcggggcggcgtcgcccacatctacaacaaccactac
gtgggactcagcaagtcgggcatcaactcccgggccggcgcccgcgccaaggtggacaac
aactacttcgaggactccaaggacgtcctgggcaccttctacaccgacgcggccggctac
tggcaggtcagcggcaacgtcttcgacaacgtgacgtggtccggccgcagcagcgacaac
aaccccgcgggcccggacccgcagtccaacacctcggtcagcatcccctacgcctacacc
ctcgacggggcgaactgcgtaccgtccgtcgtgagccggacggcgggcgcgaacacgggg
ctgaaggtgtcggacggcagctgctcgccgcagacgccggacccgaccgaccccaccccc
gacccgacgccggacccgaccgaccccactccgcccaccgggaccaacctcagcctcggg
gccggctcggacggctccagcaaggcgagcgggaccagctacggcgacgtgcgggacggt
gacatgagcacctactggtcaccgtccggctcgaccggttccgtctcgatcaagtggagc
tccgccaccaccgtctccaagatcaacgtgcgcgaggcggcgggctccacgggctccatc
acctcctggaaggtcggcaacgccgacaccggcgccgtcctggcctccggcagcggggcg
ggcgtcatcacgttcccgcagacctcgctgcgcaagatcacgttcgagatcacgggctcg
acgggcacgccgaaggtcgccgagttcgagacgtacgccggctga
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