Streptomyces sp. SirexAA-E: SACTE_6182
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Entry
SACTE_6182 CDS
T01601
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ssx
Streptomyces sp. SirexAA-E
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssx03021
]
SACTE_6182
Transcription machinery [BR:
ssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SACTE_6182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_37
DUF7343
MarR_2
HTH_23
KORA
GerE
HTH_3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AEN13958
UniProt:
G2NRM9
LinkDB
All DBs
Position
complement(7032295..7033191)
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AA seq
298 aa
AA seq
DB search
MTAMSVRTTEAIGTATPRCDEADADSHEAVLPWIEDAGKVAPQDARAMSKLFFDRLQTLE
EGTHEYQYARNTLIEMNLSLVRYAASRFRNRGGDDTEDIIQVGTIGLIKAIDRFDLSREV
EFATFAVPYIVGEIKRFFRDTTWSVHVPRRLQELRVELAKAKETLSAQLDRDPTVAELAT
HLDLPEEEIIEGLVAANGYSAGSLDTPSADSESGNEQRAYADLLGEDDPGMESVENLHAL
APLLRQLDDRERTIVRMRFGQEMTQAQIGAELGVSQMHVSRLLSRIVQRLRTGMCVEA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacggccatgtcagtgcggaccaccgaagcgatcggcacagcgaccccgcggtgcgac
gaggcggacgcggattcccacgaggccgtacttccgtggatcgaggacgccgggaaggtc
gccccgcaggacgcgcgggcgatgtcgaagctcttcttcgaccggctccagaccctcgaa
gagggcacccacgaataccagtacgcgcgcaacaccctcatcgagatgaacctctcactg
gtgcgctacgccgcctcgcggttccgcaaccggggcggggacgacaccgaggacatcatc
caggtgggcacgatcggcctgatcaaggcgatcgaccggttcgacctgtcccgtgaggtg
gagttcgccaccttcgcggtgccctacatcgtcggtgagatcaagcgcttcttccgcgac
accacctggtccgtccatgtgccgcgccgcctccaggagcttcgggtggagctcgcgaag
gcgaaggagaccctgtcggcacagctcgaccgcgacccgacggtcgccgagctcgccacg
cacctggatctccccgaggaggagatcatcgagggcctggtcgccgccaacggctactcg
gcgggatcgctggacaccccgagcgccgacagcgagtccggcaacgagcagcgcgcgtac
gcggacctgctcggcgaggacgacccgggcatggagagcgtcgagaacctccacgcgctg
gccccgctgctccggcagctggacgaccgcgagcggaccatcgtccgcatgcggttcggc
caggagatgacgcaggcccagatcggcgccgagctgggcgtctcccagatgcacgtctcg
cggctgctcagcaggatcgtgcagcggctgcgtacgggaatgtgcgtcgaggcctga
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