Sphingobium sp. SYK-6: SLG_00050
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Entry
SLG_00050 CDS
T01622
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03030
DNA replication
ssy03430
Mismatch repair
ssy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLG_00050 (dnaQ)
03430 Mismatch repair
SLG_00050 (dnaQ)
03440 Homologous recombination
SLG_00050 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssy03032
]
SLG_00050 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_00050 (dnaQ)
Enzymes [BR:
ssy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLG_00050 (dnaQ)
DNA replication proteins [BR:
ssy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLG_00050 (dnaQ)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLG_00050 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAK64680
LinkDB
All DBs
Position
3065..3766
Genome browser
AA seq
233 aa
AA seq
DB search
MREIVFDTETTGLDPLTGDRLVEIGCVELVNRIPTGATYHCYFNPERAMPSAAEAVHGLS
DRFLADKPRFAEKAAELLDFLGDDKLVAHNARFDFGFLNAELERCRLPLVDLERMIDSLT
IARTLHPGAKHSLDALCSRYGIDRSHRVKHGALLDAELLAQLYIELTGGRQIGLGLVAEA
QIVVGTSAAVLRPAMAGRAPRPPRPFFPSEAELARHAAFLDKLDNPIWRDGVA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatcgtctttgatacggaaaccactggccttgatccgctgaccggggatcgg
ctcgtcgagatcggctgtgtggagctggtcaatcgcattcccaccggcgcgacctatcat
tgctatttcaatccggagcgcgcgatgccctcggcggccgaggccgtgcatggcctgtcc
gaccggttcctggcggacaagccgcgctttgcggagaaggccgccgagctgctggacttt
ctgggcgacgacaagctggtggcgcacaatgcccggttcgatttcggcttcctcaatgcg
gagctggaacgctgccggctaccgctcgttgatctcgagcgcatgatcgacagcctgacc
atcgcccgcacgcttcatcccggggcaaagcacagcctcgatgcgctgtgctcgcgctac
ggcatcgatcgcagccaccgcgtcaagcatggcgccttgctggacgccgagctgcttgcg
caactctatatcgaactgaccggtggacggcagatcggccttggcctggtggcggaggcg
cagatcgtggtcggcacgagcgcggccgttctgcgtcccgccatggctggccgcgcgccg
cgtccgccccgcccctttttccccagcgaagcggaactggcgcgccatgcggcctttctc
gacaagctggacaatcccatctggcgggatggcgtggcctag
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