Sphingobium sp. SYK-6: SLG_00720
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Entry
SLG_00720 CDS
T01622
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase alpha chain
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00020
Citrate cycle (TCA cycle)
ssy00640
Propanoate metabolism
ssy00660
C5-Branched dibasic acid metabolism
ssy00720
Other carbon fixation pathways
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01120
Microbial metabolism in diverse environments
ssy01200
Carbon metabolism
Module
ssy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SLG_00720 (sucD)
00640 Propanoate metabolism
SLG_00720 (sucD)
00660 C5-Branched dibasic acid metabolism
SLG_00720 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
SLG_00720 (sucD)
Enzymes [BR:
ssy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
SLG_00720 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BAK64747
UniProt:
G2IIR7
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All DBs
Position
67556..68440
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AA seq
294 aa
AA seq
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MSILVDKNTKVITQGMTGATGTFHTEQALAYGTQMVGGVTPGKGGTTHIGLPVFDTVEEA
VKKTGATASVIYVPPPFAADSILEAIDAEVPLIVTITEGIPVLDMVRVKRALSGSKSRLI
GPNCPGVLTPGECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQTTAVGIGG
DPVNGTNFIDVLELFLADDATESIIMIGEIGGNAEEQAAQFLIDEAKRGRKKPMAGFIAG
RTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEAAGIKVAASPSELGTTLLEVLKG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctcgtcgacaagaataccaaggtcatcacgcagggtatgaccggtgccacc
ggcaccttccacaccgagcaggcgctggcttatggcacgcagatggtcgggggcgtcacg
ccgggcaagggcggcacgacccatatcggcctgcccgtcttcgacacggtcgaggaagcg
gttaagaagaccggcgcgacagccagcgtcatctatgtgccgccgccattcgctgctgat
tcgatcctggaagcgatcgatgccgaggttccgctgatcgtcaccatcaccgagggcatt
ccggtgctcgacatggtgcgcgtcaagcgggcgctctcgggcagcaagtcgcgcctcatc
ggccccaactgccccggcgtgctgacgcccggcgagtgcaagatcggcatcatgcccggc
tccatcttcaagaagggcagcgtgggcgttgtttcccggtccggcacgcttacctatgaa
gccgtgttccagacttcgaatgcgggcctcggccagacgacggccgtcggcatcggcggc
gatccggtgaacggcacgaacttcatcgacgtgctcgagctgttcctggcggacgacgcg
accgaatcgatcatcatgatcggcgagatcggcggcaatgccgaggagcaggccgcgcag
ttcctgatcgacgaggcaaagcgcgggcgcaagaagccgatggccggcttcatcgcgggc
cgcacggcgcctcccggccgtcgcatgggccatgccggggcgatcgtctcgggcggccag
ggcggcgcggaagacaagatcgccgcgatggaagcggccggcatcaaggtcgcggcgagc
ccgtccgaactgggcacgacgctgctcgaggtgttgaagggttga
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