Sphingobium sp. SYK-6: SLG_01560
Help
Entry
SLG_01560 CDS
T01622
Name
(GenBank) long-chain fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00061
Fatty acid biosynthesis
ssy00071
Fatty acid degradation
ssy01100
Metabolic pathways
ssy01212
Fatty acid metabolism
ssy02024
Quorum sensing
ssy04146
Peroxisome
Module
ssy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SLG_01560
00071 Fatty acid degradation
SLG_01560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SLG_01560
09145 Cellular community - prokaryotes
02024 Quorum sensing
SLG_01560
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssy01004
]
SLG_01560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssy04147
]
SLG_01560
Enzymes [BR:
ssy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SLG_01560
Lipid biosynthesis proteins [BR:
ssy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SLG_01560
Exosome [BR:
ssy04147
]
Exosomal proteins
Exosomal proteins of breast milk
SLG_01560
Exosomal proteins of breast cancer cells
SLG_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAK64831
UniProt:
G2IJG1
LinkDB
All DBs
Position
complement(154608..156413)
Genome browser
AA seq
601 aa
AA seq
DB search
MRAFEHFPSLTAMFFARAAEGGDRPFLWAKSEDDWQSTSWSQASRQVASMAKALQSLGIE
PGDRVMLVSENRPEFCIADLAIMAAGAITVPTYTTNTIRDHEHIIANSGARAVIFSTAKI
AKTLMPAVMRSPIEFAIAIEPVKSMQSSAVAIHDWDALLALHPADPWACADALTATREDT
ACIIYTSGTGGAPRGVVQHHGAILCNVEGCVDIIAGDFGWDEEVFLSFLPISHAYEHSGG
QFLPIGLGGQIYYAESLEKLGANIAEVRPTIMVVVPRLFELLRMRVSRAVEKQGRLPALL
LEQAQRLGGKRSAHGGRLPLLDRPLQAVLNRTIIPKVRSRFGGRMKALVSGGAPLNPDVG
AFFDALGLTLLQGYGQTEAGPVVSCNRPSRGLRMDSVGPPLKDVEVRIADDGEILVRGEL
VMKGYWNNPAETARAIRDGWLHTGDIGEFDEGGRLRITDRKKDLIVNDKGDNVAPAKLEG
MLTLQPEIGQVMVHGDRRPHIVALIVPDPEWTTEWATTRHKSPELIALREDPAFLAAIRA
AVDRVNADLSIIEKIRRFALADEPFTIENEMLTPKQSIRRHIIRAKYQSQLDALYGGKAQ
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgctttcgaacatttcccgagcctcaccgccatgttcttcgcgcgggcggccgag
ggcggtgatcgccctttcctctgggcaaagagcgaggatgactggcaatcgacgagctgg
tcccaggcatcacgacaggtcgcatcgatggcgaaggcgctgcaatcgctcggcatcgaa
ccgggcgaccgggtgatgctggtgagcgagaaccggcccgaattctgcatcgccgatctc
gcgatcatggccgccggcgccatcaccgtgcccacctacaccaccaataccatccgcgat
catgagcatatcatcgccaatagcggggcacgcgcggtcatcttctcgaccgccaagatc
gcgaagactctcatgcccgccgtgatgcgctcgccgatcgagttcgcgatcgccatcgag
ccggtgaaatcgatgcagagcagcgccgttgccatccatgactgggatgcgctgctggcg
ctccaccccgccgacccgtgggcctgcgcagacgcgcttaccgccacgcgcgaggacacc
gcctgcatcatctacaccagcggaaccggcggcgcgccgcgcggcgtcgtccagcatcac
ggcgcgatcctctgcaatgtcgagggctgcgtggacatcatcgcgggcgatttcggctgg
gacgaggaggttttcctctccttcctgccgatcagccatgcctatgagcattccggaggc
cagttcctgcccatcggccttggcgggcagatctattatgccgagagcctcgagaagctc
ggcgcgaacatcgccgaggtgcgcccgacgatcatggtcgtcgtcccccgcctgttcgag
ctgctgcgcatgcgcgtatcccgggcggtggagaagcaggggcggctgccggcgctgctg
ctggagcaggcccagcgccttgggggcaagcggagcgcgcatggcggccggcttccgctg
ctcgaccggccgctccaggccgtgctcaatcgcacgatcattcccaaggtccgcagccgg
ttcggagggcggatgaaggcacttgtctcgggcggcgcaccgctcaatcccgatgtcggc
gccttcttcgacgcgctggggctgacgctgctgcaaggctatggccagaccgaggcggga
ccagtggtcagctgcaatcgcccctcgcgcggcctgcgcatggatagcgtgggaccaccg
ctcaaggatgtcgaagtgcgaatcgcggacgatggcgaaatcctcgtgcgcggcgaactg
gtgatgaaaggctactggaacaacccggccgagaccgcgcgcgccattcgcgacggctgg
ctgcacaccggtgacatcggcgaattcgacgagggcggccggctgcgcatcacggatcgc
aagaaggacctcatcgtcaatgacaagggcgacaatgtcgcgccggcaaagctggaaggc
atgctcacgctccagccggagatcggccaggtcatggtccatggcgaccggcgcccgcat
atcgtggcgctgatcgtgcccgatccggagtggacaacagaatgggcaacgacgcggcac
aaatccccggagctgatcgccttgcgcgaggacccggcctttcttgccgccattcgcgcg
gcggtcgatcgggtgaacgcggacctttccatcatcgagaagatccggcgtttcgccctg
gccgacgagcccttcaccatcgagaacgagatgctgacgcccaagcaatcaatccgccgg
catatcatccgggcgaagtaccagtcgcagctggatgccctgtacggcggcaaggcgcag
gattga
DBGET
integrated database retrieval system
