KEGG   Sphingobium sp. SYK-6: SLG_01860
Entry
SLG_01860         CDS       T01622                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy00300  Lysine biosynthesis
ssy00470  D-Amino acid metabolism
ssy01100  Metabolic pathways
ssy01110  Biosynthesis of secondary metabolites
ssy01120  Microbial metabolism in diverse environments
ssy01230  Biosynthesis of amino acids
Module
ssy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SLG_01860 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SLG_01860 (lysA)
Enzymes [BR:ssy01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SLG_01860 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BAK64861
UniProt: G2IJJ1
LinkDB
Position
190473..191735
AA seq 420 aa
MDHFAYKDGVLHAENVSMSTIADAVGTPVYVYSRATLERHARVFREALDAVPRKHIAFAI
KANPNLAVLRVLAREGYGADIVSGGEMQRALAAGMPARDIVFSGVGKTRAELAAALEAGI
GQFNIELEEEGVVLAQIAQEMGRTADAVLRVNPDVDAGTHAKISTGMKENKFGVPIDQAG
WIFARLATLPGLAMRGIAIHIGSQLFDLAPLEAAYGKIGALMRDLRAAGHVIDRVDLGGG
LGVPYERDKIPPSPADYGAMVARATKDWDATLYFEPGRVIVGNAGVLLTRVIWVKPGVIR
PYVIVDAAMNDLARPAMYDAWHDFEAVAPTGERFVANIAGPVCESGDTFAMARDIDLVKA
GDLAVFRTAGAYGATMASTYNSRPLVPEVMVDGDRFAVVADRIMPEAIIAAERMPDFLQD
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggatcatttcgcctacaaggatggcgtgctgcacgccgagaacgtgtcgatgagcacg
attgccgatgcggtcggcacgccggtatatgtctactcccgtgccacgctggagcggcat
gcccgggtgttccgtgaggcgctggacgcagtcccccgcaagcacatcgccttcgcgatc
aaggccaatcccaatcttgccgtgctgcgcgtgctggcgcgcgagggctatggcgcggac
atcgtgtcgggcggggagatgcagcgggcgctggctgccggcatgcccgcgcgggacatc
gtcttctccggcgtcggcaagacccgcgcggagctggcggcggcgctggaagccggcatc
ggccagttcaatatcgagctggaggaggaaggcgttgtcctcgcgcagatcgcgcaggaa
atggggcgcaccgccgatgccgtgctgcgcgtcaatccggatgtcgatgcgggcacgcat
gccaagatctcgaccggcatgaaggaaaacaagttcggggtgccgatcgatcaggcgggc
tggatttttgcgcggctggcgacgctgccgggtctcgccatgcgcggcatcgcgattcac
atcggcagccagctcttcgaccttgccccgctggaagcggcctatggcaagatcggagcg
ctcatgcgcgatctgcgcgcggccggtcacgtcatcgaccgggtcgatcttggcggcggt
ctgggcgtgccttacgagcgcgacaagataccgccgagccccgccgactatggcgcgatg
gtggcccgcgcgacgaaggactgggacgcgacgctctatttcgagccgggccgcgtgatc
gtgggcaatgccggcgtgctgttgacgcgcgtcatctgggtgaagccgggggtgatccgg
ccttatgtgatcgtcgatgccgccatgaacgacctcgcccggcctgccatgtatgatgcc
tggcacgatttcgaggccgtggcgccgacgggcgaacgcttcgtcgccaatatcgcgggc
ccggtctgcgagagtggcgacactttcgcgatggcgcgcgatatcgatctggtgaaggcg
ggtgaccttgcggtgttccgcacagcgggcgcttatggcgcgaccatggcaagcacgtac
aacagccgcccactggtgcctgaggtcatggtggatggcgaccgtttcgccgtcgtggcc
gatcgcatcatgcccgaggcgatcattgcggccgagcgcatgccggacttcctccaagat
tga

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