Sphingobium sp. SYK-6: SLG_02050
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Entry
SLG_02050 CDS
T01622
Name
(GenBank) putative ABC transporter
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SLG_02050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_02050
Transporters [BR:
ssy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SLG_02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Tower
nSTAND3
AAA_29
AAA_25
RsgA_GTPase
MMR_HSR1
ABC_ATPase
AAA_10
APS_kinase
DUF87
Zeta_toxin
AAA_18
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BAK64880
UniProt:
G2IJL0
LinkDB
All DBs
Position
complement(210800..212671)
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AA seq
623 aa
AA seq
DB search
MAMKQADGIAGGEGTTTPSAWVTLRRFLPYLWPAGEPRLKARILLALVLVLAGKAITLVM
PFAYKGVIDNMGPGMESGVALAIALVLAYAGARFGGVLSDNLRNVAFERVGRNAQRLIAE
QTLRHLHNLSLRFHLNRKTGGVTRVIERGTSSIETMLHFLIFNIGPTAIELVAVSVIFQI
KFGFGLVAATLVMIAAYIGFTQKVTEWRNNLRREMVDLDTGATAHAVDSLLNFETVKYFS
AEEREAARYSQAQRRYMDAATKSNNSLAFLNIGQALITNLMMGGAMAFTVWGWSQGRFTP
GDVVLVNALLMQLFRPLDLLGMVYRTIRQGLIDMEAMFRLIDTDAEIRDRPDAPPLEIRA
GEVRFDHVVFGYEPERTILKDVSFTVPPGSTLAIVGHSGAGKSTIARLLFRFYDIQGGRI
LIDGQDIAQVRQTSLRRAIGIVPQDMVLFNDTIGFNIGYGRDDATQADIEAAARGAAIDR
FIETQPLGYDTRVGERGLKLSGGEKQRVAIARTLVKDPPILILDEATSALDSRTEAAIQG
VLEDVSARRTTIIVAHRLSTIVHADNIIVLEDGRIAEQGSHASLLASGGIYAQMWARQAA
ERMNPEAGEIAVRRSGRLEDAAE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaagcaggcagacgggattgccggtggcgaggggaccaccacgccatcggca
tgggtgacgctgcggcgcttcctgccctatctctggcccgccggcgagccgcgcctgaaa
gcgcgcatcctcctggcgctggtgctggtgctggccggcaaggcgatcacgctggtgatg
cccttcgcctacaagggcgtgatcgacaatatggggccgggcatggagagcggcgtggcc
ctcgccatcgcgctggtgcttgcctatgccggcgcgcggttcggcggcgtgctctcggac
aatctgcgtaatgtcgccttcgagcgggtggggcgcaacgcgcagcggctgatcgccgaa
cagaccttgcgccacctgcacaatctctcgctgcgctttcacctcaaccgcaaaaccggc
ggcgtcacgcgcgtcatcgagcggggcacgtcgtcgatcgagacgatgctccacttcctg
atcttcaacatcggccccaccgcgatcgagctggtcgccgtctccgtgatcttccagatc
aagttcggcttcgggcttgttgccgccacgctggtgatgatcgcggcctatatcggcttc
acgcagaaggtgacggaatggcgcaacaatctgcgccgggagatggtggacctcgacacc
ggcgccaccgcccatgcggtcgacagcctgctcaacttcgaaacggtgaaatatttcagc
gccgaggagcgcgaggcggcgcgctacagccaggcgcagcgacgctacatggacgccgcg
accaagagcaataacagcctcgccttcctcaatatcggccaggccctcatcacgaacctc
atgatgggcggtgcgatggccttcaccgtgtggggctggagccagggacgcttcacgccc
ggcgacgtggtgctggtcaatgccctgctgatgcagctcttccgcccgctcgacctgctg
ggcatggtgtatcgcacgatccggcagggcctcatcgacatggaagccatgttccgcctg
atcgacaccgatgccgagatccgcgaccggccggacgccccgccgctggagatccgcgcc
ggcgaagtgcggttcgaccatgtcgtcttcgggtacgagccggagcggaccatcctcaag
gacgtctccttcaccgtgcccccgggctcgacactggccatcgtcgggcacagcggcgcg
ggcaagtcgaccatcgcccggctgctcttccgtttctacgatatccagggcggccgcatt
ctcatcgacgggcaggacatcgcgcaggtccggcagacctcgctgcggcgcgccatcggc
atcgtcccgcaggacatggtgctgttcaacgacacgatcggcttcaacatcggctatggc
cgggatgatgcgacgcaggcggacatcgaggccgcagcccggggcgcggcgatcgaccgc
ttcatcgagacgcagccgctcggctacgacacacgggtcggcgagcggggcctcaagctt
tccggcggggagaagcagcgcgtggccatcgcacggacgctggtgaaggacccgccgatc
ctcatcctcgacgaagcgacgagtgcgctggacagccgcaccgaagccgcgatccagggc
gtgctggaggacgtctcggcgcgccgcaccaccatcatcgtcgcgcaccggctctcgacg
atcgttcacgcggacaacatcatcgtgctggaggatggccgtattgccgaacaggggtcg
catgcatccctgctcgccagcggcgggatctacgcccagatgtgggcacggcaggcagcc
gaacgaatgaacccggaagcgggcgagatcgccgtgcggcggagcgggcggctggaagat
gcggcggaatga
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