Sphingobium sp. SYK-6: SLG_02360
Help
Entry
SLG_02360 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_02360
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_02360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
P68HR
Motif
Other DBs
NCBI-ProteinID:
BAK64911
LinkDB
All DBs
Position
247568..250507
Genome browser
AA seq
979 aa
AA seq
DB search
MKKFSNQTLLKVAAAPAVLGLALLSTAANAQEPQGADDAETGDVIIITGSLIKNPNLQGS
TPVNVTTADEIDLLQSNVAEEMLREIPGIVPSIGSAVNNGNGGNSFVNLRGLGSNRNVVL
LDGVRIVPADLVGRVDLNNIPLALIERVDVLTGGASTTYGADAISGVVNFVTKQDFTGLE
ATAASQITERGDGKTYRFDVTTGVSFDDGRGNIVLSVGYQHADPVYQGQRKIGMNTIGSY
TGASAGSGTAVPTRFSVPGSGTLQIAPDGQSLVGTYAPFNFAPDNIFQTPFERYNIYSAA
RYEVADGIEVYSRGLFTKNTVDTIIAPSGAFGIAVDIPLSNPYLPTGIRNQFCSAFDISG
ADCAAAATATDPSDPAYREVTTAMFRRAVEVGPRISEYSNTVFDYRLGLRAGVTDSIDFD
VYGAYGEAEQVQTIMGYTLNSRVRESLLATNTTTCLDGTRSDCVPVNWFGATPGGFTSEQ
IDFLTGESTVRVKTSLTQAHATLSGDFGVASPLAADPISFAVAGEYRKYTAQQASDTLAE
SGDLGGSGGPAPNIRGAFDVYEAIGELVVPVVTDKPFFEELTIQAGIRYSSYTIDAVGTP
SFDTTTWKVQGTWTPTPGFTLRGGYSRAVRAPNINELFAPVSTGLTSLSSDPCASINDEG
VRISPGPTGVLRDVCLAQGATPANVDSINVPIASQANQTSGGNINLKPETSNSYTIGAIF
QPAVLSGFSATIDYYNIKLTGAISTPTPGDAMDACFAGSNLSPTNPACTVIRRDPLTGGL
NGDPTTTPGLFLASSNLGELATDGIDLTMNYRHQLGFADLALNFVGNWTNKSTFKSSPSA
VALDCVGLVSANCGSLQPELQWSLRTTLAFSGFDVSFLWRHIDSFVHEDAPDLFVGVPFG
YTESFDFNRIKAYDYFDLTARFNIMENLSLTFTVQNLFDKDPPLVGSDAGGTAWNSGNTF
PSTYDALGRRYGAQVKLRF
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaattctccaaccaaacattgctgaaggtcgctgcggcgccggccgtgctgggc
ctcgccctgctgtcgacggcggccaacgcgcaggagccgcagggtgcggacgacgcggaa
accggtgacgtcatcatcatcaccggctcgctcatcaagaaccccaacctgcagggctcg
acgccggtcaatgtgaccaccgccgacgaaatcgaccttctccagtcgaacgtcgccgaa
gagatgctgcgtgaaatcccgggcatcgtgccgagcatcggctccgcggtgaacaacggc
aacggcggtaactccttcgtcaaccttcgcggcctgggctccaaccgcaacgtcgtcctg
ctcgatggcgtgcgcatcgtccccgccgacctggtgggccgcgtcgacctcaacaacatc
ccgctcgccctcatcgagcgcgtggacgtgctgaccggcggcgcctcgaccacctacggt
gccgacgccatctcgggtgtcgtcaacttcgtcacgaagcaggacttcaccggcctcgaa
gccaccgctgccagccagatcaccgagcgcggcgacggcaagacctatcgcttcgacgtg
accacgggcgtcagcttcgacgacggccgcggcaacatcgtcctctccgtcggctaccag
catgctgatccggtctatcagggccagcgcaagatcggcatgaacaccatcggttcctac
accggcgcttcggccggttctggtaccgcggttcccacccgcttcagcgtcccgggttcg
ggcacgctgcaaatcgcgcccgacggccagtcgctcgtcggcacctatgcgccgttcaac
ttcgcgccggacaacatcttccagacgccgttcgagcgctacaacatctactcggctgct
cgctatgaagtcgccgacgggatcgaagtctattcgcgcggcctattcacgaagaacacg
gtcgacacgatcatcgcgccctccggcgcattcggtatcgccgtcgacattccgctgagc
aacccctacctgcccactggcatccgcaaccagttctgttcggccttcgacatctcgggt
gcggattgcgctgcagccgccaccgcgaccgatccgagcgatccggcctaccgggaagtg
accacggccatgttccgccgcgcggtcgaagtcggtccgcgtatcagcgaatattcgaac
accgtgttcgactatcgcctcggcctgcgtgccggcgtcacggactcgatcgatttcgac
gtctacggcgcctatggcgaggccgagcaggtccagaccatcatgggctacacgctgaac
tcgcgcgtgcgtgaatcgctgctggcgaccaacaccacgacctgcctcgacggcacgcgt
tcggactgcgttcccgtcaactggttcggcgccacgcccggtggcttcaccagcgagcag
atcgacttcctcaccggcgagagcacggtgcgcgtcaagacgtcgcttacccaggcccac
gccaccctgtcgggtgacttcggcgtggccagcccgctcgcggctgacccgatcagcttc
gccgtcgccggcgagtaccgcaagtacacggcgcagcaggcatccgacacgctggcagag
agcggcgatctgggcggctccggcggcccggctccgaacatccgcggcgccttcgacgtc
tacgaggccatcggcgagctggtcgtcccggtcgtgacggacaagcccttcttcgaagag
ctgacgatccaggcaggtatccgctactcgagctacacgattgatgccgtgggcacgccg
agcttcgatacgacgacttggaaggtgcagggtacctggaccccgacgccgggcttcacg
ctccgcggcggttactcgcgtgccgttcgtgcgccgaacatcaacgagctgttcgcgccc
gtcagcaccggcctcaccagcctgagctccgatccgtgcgcctcgatcaatgacgaaggc
gtgcgcatctcgcccggaccgacgggtgttctgcgtgatgtctgccttgcgcagggtgca
acgccggccaacgtcgactcgatcaacgtgccgatcgccagccaggccaaccagacgagc
ggcggcaacatcaacctgaagccggaaacgtcgaacagctacacgatcggcgcgattttc
cagccggccgtgctgtcgggcttctcggccacgatcgactattacaacatcaagctgacc
ggcgcgatttccacgccgacgccgggtgacgcgatggatgcctgctttgcaggcagcaac
ctgagcccgacgaacccggcttgtacggtcatccgtcgcgatccgctcacgggcggcctg
aacggtgatccgacgacgacgccgggcctcttcctggcttcgtcgaacctcggcgagctg
gcgacggacggcatcgacctcacgatgaactatcgtcatcagcttggctttgccgatctg
gccctgaacttcgttggcaactggacgaacaagtcgacgttcaagtcctcgcccagcgct
gttgcgctggactgcgtcggcctggtcagcgcgaactgcggctcgctccagcccgaactg
cagtggtcgctccgtaccacgctggcgttcagcggtttcgacgtgtcgttcctgtggcgc
cacatcgacagcttcgtgcatgaagatgcgcccgacctcttcgtcggcgtgcccttcggc
tacacggagtcgttcgacttcaaccgcatcaaggcctacgactatttcgacctcacggcg
cggttcaacatcatggagaatctgtccctcaccttcacggtgcagaatctcttcgacaag
gatccgccgctcgtcggttcggacgctggtggcaccgcatggaacagcggcaacaccttc
ccgtcgacctacgacgcgctgggccgtcgctacggcgcccaggtcaagctgcgcttctga
DBGET
integrated database retrieval system
