Sphingobium sp. SYK-6: SLG_03690
Help
Entry
SLG_03690 CDS
T01622
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03030
DNA replication
ssy03410
Base excision repair
ssy03420
Nucleotide excision repair
ssy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLG_03690 (polA)
03410 Base excision repair
SLG_03690 (polA)
03420 Nucleotide excision repair
SLG_03690 (polA)
03440 Homologous recombination
SLG_03690 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssy03032
]
SLG_03690 (polA)
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_03690 (polA)
Enzymes [BR:
ssy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLG_03690 (polA)
DNA replication proteins [BR:
ssy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SLG_03690 (polA)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SLG_03690 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLG_03690 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
HAMP_N3
Motif
Other DBs
NCBI-ProteinID:
BAK65044
UniProt:
G2IKI1
LinkDB
All DBs
Position
complement(376619..379411)
Genome browser
AA seq
930 aa
AA seq
DB search
MSSRNHLYLVDGSSYIFRAYHQLPPLTNRHGLNVGAVYGYTTMLWKLADALDKEEGPTHL
AVILDKGSHTFRNDLYDQYKAHRPPAPEDLVPQFPLIREATRAFSLPCIEEDGFEADDII
ATYTVQARAQGWDVTIVSSDKDLAQLIQPGVDMLDTMKNERRSDSYVMEKFGVPPEKLRD
VLALMGDSVDNVPGVPGVGAKTAAKLILEYGDLDTVLAAAPDMKPSKLRERLIEHADLAR
LSRDLVTLHCEVPLPQTLDELKLDGIPPEPLRHFLEDQGFSSLLSRMAVHAPGRTKADPV
AAAAAPADPGTPDFVPLPPIDCDSYETVTTFERLDAWIAQARESGIIAIDTETDSLDSIA
AGLVGICLATAPGTACYIPLAHKSSDDMFGETPPQLPMAGVVARLAPLLVDPAVLKIGHN
IKYDINVLARHGLQVSPIDDTMVMSFDLDAGQSLAGHGMDEIAHAVLEHSCISYKDVTGT
GKKAISFAQVPLDAATRYGGEDADVTWRLWTRFRPRLHQEGATRIYELVDRPLIPVVAGM
ERAGVKVDRDHLSRLSGRFAQEMARLEEEIHAEAGQAFAIGSTQQLGAILFEKMGLKGGK
KGKSGAYSTDVTVLEKMKADGVKIAGLVLDWRQLAKLKSTYTDALQAQINRETGRVHTSY
SLTGAQTGRLSSTDPNLQNIPIRTEMGRQIRDAFVAEPGNVILAADYSQIELRLAAHMAD
VPQLRAAFQRGEDIHAATAQELFGEVNRDTRGRAKTINFAILYGISRWGLAARLEIDPEE
AQAMIARYFDRFPGISVYINETLEKARASGHTLTLFGRKTWFPQIRSSIQHVRQGAERAA
INAPIQGTSADIIKRAMARMGPALREAGLERVRMLLQVHDELVFELPESDVDAATPVIRE
VMAGAAAPMVTLSVPLGVEIGTGASWGAAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccggaatcacctctatctcgtcgatggctcgagctacatcttccgcgcctat
caccagcttcccccgctgacgaaccggcacgggctgaacgtgggcgccgtctatggctac
accaccatgctctggaagctggccgatgcgctcgacaaggaggaagggcccacgcatctc
gcggtgatcctcgacaagggctcgcacaccttccgcaatgatctctacgatcagtacaag
gcgcatcgtccgcccgcgccggaggatctggtgccgcaattcccgctgatccgggaagcg
acccgcgccttctcgctgccctgcatcgaggaggacggcttcgaggcggacgacatcatc
gccacctataccgtgcaggcgcgcgcgcagggctgggacgtcacgatcgtctcctcggac
aaggaccttgcccagctcatccagccgggcgtggacatgctcgacacgatgaagaacgag
cggcgcagcgacagctacgtgatggagaagttcggcgtaccgccggagaagctgcgcgac
gtgctcgcactgatgggcgacagcgtggacaatgtgccgggcgtgccgggcgtgggcgcc
aagacagcggcgaagctcatcctcgaatatggcgatctcgacaccgtgctggccgccgcg
ccggacatgaagccctcgaaattgcgggagcggctcatcgagcatgccgacctcgcccgc
ctctcgcgcgatctggtgacgctgcattgcgaagtgccgctgccgcagacgctcgacgag
ctgaagctggacggcatcccgcccgagccgctgcggcatttcctggaggatcagggcttc
agctcgctgctctcgcgcatggcggtccatgcgccgggccgcacgaaggccgatccggtg
gcggcggcggccgcgccggcagaccccggcacgcccgatttcgtgcccctgccgcccatc
gattgcgacagctacgagacggtgacgaccttcgagcggctcgacgcatggatcgcgcag
gcgcgcgaaagcggcatcatcgccatcgatacggagacggattcgctggacagcatcgcc
gccgggctcgtcggcatctgtctcgccaccgcgccgggcacggcctgctacatcccgctt
gcccacaagagcagcgacgacatgttcggcgagacgccgccgcaattgccgatggcggga
gtcgtcgcgcggctcgcgccattgctggtcgatccggccgtgctcaagatcggccacaac
atcaaatatgacatcaacgtgctggctcgccatggcctgcaggtcagccccatcgacgat
acgatggttatgagcttcgacctcgatgccgggcagtcgctcgccgggcacggcatggac
gagatcgcgcatgccgtgctggagcacagctgcatcagctacaaggacgtcaccggcacc
ggcaagaaggcgatcagcttcgcgcaggtgccgctcgacgccgcgacgcgctatggcggg
gaagatgcggacgtcacctggcggctgtggacgcgtttccgccctcgcctgcaccaggaa
ggcgcgacgcgcatctatgagctggtcgaccggccgctcatcccggtcgtggccggcatg
gaacgcgccggcgtgaaagtggaccgggatcatctctcgcgcctgtccggccgctttgcg
caggaaatggcgcggctggaagaggagatccatgccgaggcgggccaggccttcgccatc
ggctccacccagcagctcggcgcgatcctgttcgagaagatgggcctcaagggcggcaag
aagggcaagtcgggcgcttactcgaccgacgtgaccgtgctcgagaaaatgaaggcggat
ggcgtgaagatcgccgggctggtgctcgactggcgccagctcgccaagctcaagtcgacc
tacaccgatgcgctgcaggcgcagatcaaccgggagaccggccgcgtccacaccagctac
tcgctcaccggcgcgcagaccgggcgcctgagctcgaccgaccccaatctccagaacatc
ccgatccgcaccgagatgggccggcagatccgcgacgccttcgtcgccgagcccggcaat
gtcatcctcgcggcggactacagccagatcgagctgcggctggccgcgcacatggccgat
gtcccgcaattgcgcgctgccttccagcgcggggaggacattcacgccgcgaccgcgcag
gagctgttcggcgaagtgaaccgcgatacgcgcggccgcgccaagacgatcaatttcgcc
atcctctacggcatctcccgctggggcctcgcggcgcggctggagatcgacccggaggaa
gcgcaggccatgatcgcccgctatttcgatcgcttccccggcatctccgtctacatcaac
gagacgctggaaaaggcccgggcgagtggccacaccctcaccctgttcggtcgcaagaca
tggttcccgcagatccggtcatccatccagcatgtgcggcagggcgccgagcgcgcggcg
atcaatgcgccgatccagggcaccagcgcggacatcatcaagcgcgccatggcccgcatg
ggcccggcgctgcgcgaggccgggctggagcgggtgcggatgctgctgcaggtgcatgac
gagctggtgttcgagctgccggaaagcgatgtggacgcggccacgccggtcatccgcgaa
gtcatggccggcgccgccgcgccgatggtgacgctgtccgtgccgctcggcgtggagatc
ggcaccggcgcgagctggggcgcggcgcactga
DBGET
integrated database retrieval system
