Sphingobium sp. SYK-6: SLG_05970
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Entry
SLG_05970 CDS
T01622
Symbol
ddlA
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00470
D-Amino acid metabolism
ssy00550
Peptidoglycan biosynthesis
ssy01100
Metabolic pathways
ssy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SLG_05970 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SLG_05970 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SLG_05970 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssy01011
]
SLG_05970 (ddlA)
Enzymes [BR:
ssy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SLG_05970 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssy01011
]
Precursor biosynthesis
Amino acid ligase
SLG_05970 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
BAK65272
NITE:
SLG_05970
UniProt:
G2IM17
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All DBs
Position
619943..620914
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AA seq
323 aa
AA seq
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MSGPWKVAVLMGGWSAEREVSLSSGAGIVKALEERGHSAIPIDLGASPAEGRDLPAKLIA
ADPDIVFNALHGVPGEDGTVQGLMDIMGYRYTHSGLATSVIAIDKQLTKQHLVPHGIPMP
GGHIVASEDLFAADPLPRPYVVKPVNEGSSVGVAIVTAEGNYGNPIGRDVKGPWQEFDEL
LAEPFIRGRELTVAVLGDRALAVTELKPRSGFYDYDAKYTDGMTEHVCPADVPVDIAQAM
MDIALRAHRLLGCKGTSRSDFRWDDEQGVEGLFLLEVNTQPGMTPLSLVPEQARHLGMSY
GALVEAIIADALAEGTPAKGAKE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtccctggaaagtcgcggtgctgatgggcggctggtccgccgagcgggaggtg
tcgctgagcagcggcgcgggcatcgtcaaggcgctggaagagcgcgggcacagcgcaatt
cccatcgatctgggtgcgagcccggcggaagggcgcgacttgcccgccaagctgatcgcc
gccgatcccgacatcgtgttcaacgcgctgcacggcgtgccgggcgaggacgggacggtg
caggggctcatggacatcatgggctatcgctacacccatagcggccttgccacctcggtc
atcgcgatcgacaagcaactcaccaagcagcatctggtgccgcacggcatccccatgccc
ggcgggcacatcgtggcgagcgaggatctgttcgccgccgatccgctgccgcggccttat
gtggtgaaaccggtcaacgaagggtcatcggtcggtgtcgccatcgtcactgccgaaggc
aattacggcaatcccatcggtcgggacgtgaaggggccgtggcaggaattcgacgagctg
ctggccgagccgttcatcagggggcgcgagctgaccgtcgcggtgctcggcgatcgggcg
ctcgcggtgacggaactgaagcccaggagcggcttctacgattatgacgcgaaatatacc
gacggcatgaccgagcatgtctgcccggccgacgtgccggtggacatcgcgcaggcgatg
atggacatcgcgctgcgcgcgcaccggctcctcggctgcaagggcacgtcccgctccgat
tttcgctgggatgacgagcagggcgtcgagggcctcttcctgctggaagtgaacacccag
cccggcatgacgccgctcagcctcgtgcccgagcaggcgcggcatctcggcatgagctac
ggcgcgctcgtggaagcgatcattgcggacgcgctggcggaaggcacgccggcgaaggga
gcgaaggaatga
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