Sphingobium sp. SYK-6: SLG_08120
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Entry
SLG_08120 CDS
T01622
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
SLG_08120
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GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
nSTAND3
AAA_22
AAA_16
DUF7125
Rad51
PAXNEB
SLFN-g3_helicase
RecA
NACHT
ATPase_2
AAA_18
ABC_tran
AAA_30
NPHP3_N
DEAD
GvpD_P-loop
cobW
AAA_33
ResIII
IstB_IS21
AAA_29
AAA_10
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAK65487
UniProt:
G2IN39
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Position
863872..865302
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AA seq
476 aa
AA seq
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MHEIPRLASGISGLDKVLAGGFITGASYIIQGRPGAGKTILSNQIACAHVAGGGRVLYVT
LLSESHERLFQSLDSLSFFDRRKLGSEIIYVSVFQTLRDEGLDAVVKLLRKETKRQDASL
LVFDGLLNARDRADTDFDVKTFVAEVQGQAAFVGCTVLFLTSSRANEVCPEHTMVDGVIE
LTDTLAGARTVRQLQVRKSRGSKALGGLHKFEITDEGVTVFPRIETLVTPEIADAPVREG
CLATGIPNLDALIGGGVPVGSVTLLAGPTGSGKTTIGLHFLSQSTAEEPGLHFGFFETPQ
RLRAKARALGLTLAEEGDPSLTVEWTPLADNILDKLAHRLIDRVRAQGVRRLFIDGLGGF
ERAAVYRPRLVEFFASLMDQLRADGVTTLATWEIRQLLGTDVEAPATDISAILDNMILLR
RWEEDHSIIRGISVQKMRDRPFNPAICAIDFTEQGLVVGGPLSDRRALSSLPPNQG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagataccccgtcttgcgagcgggataagcggactggacaaggttctggccggc
ggattcatcactggggcctcctatatcatccagggccgaccgggcgccgggaagaccatc
ctgtctaaccagatcgcctgcgcgcacgtcgcgggcggcgggcgcgtcctctatgtcacg
ctcctttcggaaagccatgagcggctgttccagtctctggactcgctgtccttcttcgat
cgcaggaagctgggcagcgagatcatttatgtgagcgtcttccagacgttgagggacgaa
ggtctcgacgcggtcgtgaagctgctgcgcaaggagacgaagcggcaggatgcctcgttg
ctcgtgttcgacgggctgctcaatgcgcgcgaccgggcggacaccgacttcgacgtgaag
accttcgttgccgaagtgcagggacaggcggcgttcgtcggatgcacggttctcttcctc
accagttcgcgcgcgaatgaggtctgcccggagcacacgatggtggacggcgtgatcgaa
ctcaccgacacgctggccggcgcgcgcacggtgcgccagcttcaggtccgcaagtcgcgc
ggcagcaaggcgctgggcgggctgcacaagttcgagataacggacgagggcgtcaccgtc
tttccccgaatcgagactctggtcacgccggagatcgcggacgcgccggtgcgggagggc
tgccttgccactggcattccgaacctcgatgccctgatcggcggaggcgtccctgtcggt
tcggtcaccctgcttgcggggcccacgggcagcggcaagacaaccatcggtctgcatttc
ctgtcgcaatcgaccgcggaggagccggggctccatttcggctttttcgagacgccccag
cggctgcgggccaaggcaagggcgctgggcctcacactggcggaggaaggcgacccgtcg
ctgacggtggagtggacgccgcttgcagacaatatcctggacaagctcgcccatcggctg
attgatcgggtgcgggcgcagggcgtccggcggcttttcatcgatggcctgggcgggttc
gagcgcgctgcggtgtaccgtccgcggctggtcgagttttttgcctcgctgatggatcag
ttgagggctgacggggttaccacattggcaacatgggaaatccggcaactcctcggcacc
gacgtggaggcaccggcgaccgacatctcggctattctggataacatgatcctgttacgt
cgttgggaggaagatcatagcattatcaggggtatatccgttcaaaagatgcgcgatcgc
ccgtttaacccggcgatctgcgcgatcgacttcacggagcagggactggtcgtcggcggg
ccattgagtgatcgccgcgcgctctcttcgcttcctccgaaccaaggctga
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