KEGG   Sphingobium sp. SYK-6: SLG_09680
Entry
SLG_09680         CDS       T01622                                 
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy00010  Glycolysis / Gluconeogenesis
ssy00020  Citrate cycle (TCA cycle)
ssy00260  Glycine, serine and threonine metabolism
ssy00280  Valine, leucine and isoleucine degradation
ssy00310  Lysine degradation
ssy00380  Tryptophan metabolism
ssy00620  Pyruvate metabolism
ssy00630  Glyoxylate and dicarboxylate metabolism
ssy00640  Propanoate metabolism
ssy00670  One carbon pool by folate
ssy00785  Lipoic acid metabolism
ssy01100  Metabolic pathways
ssy01110  Biosynthesis of secondary metabolites
ssy01120  Microbial metabolism in diverse environments
ssy01200  Carbon metabolism
ssy01210  2-Oxocarboxylic acid metabolism
ssy01240  Biosynthesis of cofactors
Module
ssy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ssy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SLG_09680 (lpd)
   00020 Citrate cycle (TCA cycle)
    SLG_09680 (lpd)
   00620 Pyruvate metabolism
    SLG_09680 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    SLG_09680 (lpd)
   00640 Propanoate metabolism
    SLG_09680 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SLG_09680 (lpd)
   00280 Valine, leucine and isoleucine degradation
    SLG_09680 (lpd)
   00310 Lysine degradation
    SLG_09680 (lpd)
   00380 Tryptophan metabolism
    SLG_09680 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SLG_09680 (lpd)
   00670 One carbon pool by folate
    SLG_09680 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssy04147]
    SLG_09680 (lpd)
Enzymes [BR:ssy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SLG_09680 (lpd)
Exosome [BR:ssy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SLG_09680 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_oxidored NAD_binding_8 HI0933_like FAD_binding_2 Pyr_redox_3 FAD_binding_3 UDPG_MGDP_dh_N 3HCDH_N DAO
Other DBs
NCBI-ProteinID: BAK65643
UniProt: G2IP04
LinkDB
Position
1026316..1027707
AA seq 463 aa
MSGRTLRPRVLVVGGGPGGYVAAIRAGQLGLETVLVEAGRPGGTCLTRGCIPSKAIIHAA
DLFAETSRAAAQGGHLGIRLAAPPTLDLAATMRWKDGIVDRLSNGVTALLRRAQVTVLKG
WASFADAKSCTVETAEGPVRIEPEHVILATGSLPVELPSLPFGGDVLSSTEALALTELPR
TLAVVGAGYIGLELGIAFAKLGVRVALVEAAERILPLYDELLTRPVLDWLHAHDVELHLQ
ARAGGRSARGLDIETPLGDRFAIPAEKILVTVGRQPNTQGWGLETMAIAMDGRFIKVDER
CATSTRNVWAIGDVTGEPMLAHRASAQGEMVAEIIAGKRRRFDPVAIPAICFTEPEIVTV
GVERADESHVVGQFPFMANGRALSMEAGDGGGFVRTVAEKGSGRIVGLQAVGRHVSELAS
GFVALIEMGATLEDVAGMIHAHPTLGEAVHESALKALGHAIHV
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgagcggccggacgcttcgcccgcgcgtgcttgtcgtcggcggcgggccgggcggctat
gtcgccgcaatccgcgccgggcaactcggcctggagaccgtactggtcgaggccggccgg
ccgggcggcacttgcctgacgcgcggctgcattccttccaaggcgatcatccacgcggcg
gaccttttcgcggaaacgtcccgcgcggcggcgcagggcggccatctcggcatccgtctc
gccgccccgccgacgctcgatctggccgcgaccatgcggtggaaggacgggatcgtcgac
cggctgagcaatggcgtcacggccctgctgcgacgggcgcaggtgacggtgctgaagggc
tgggccagttttgccgatgccaagagctgcacggtcgagacggcggagggcccggtcagg
atcgagcccgagcatgtcatcctcgccactggctccctgccggtcgaactgccgtcgctg
ccgttcggcggggatgtgctgtcctccaccgaggcgcttgcgctcaccgaattgccgcgc
acgctggcggtggtcggcgcgggctatatcggcctggagctggggatcgccttcgccaag
ctgggcgtgcgcgtggcgctggtcgaggcggccgagcgcattctcccgctctatgacgag
ttgcttacgcgcccggtgctggactggctgcatgcgcatgacgtcgagcttcacctgcag
gcgcgggcaggcggccgatcggcgcgcgggctggatatcgagacgccgctgggggatcgc
ttcgccatccccgccgagaagatcctcgtcaccgtcggccgccagccgaacacgcagggc
tggggcctggagaccatggccatcgcgatggacgggcgcttcatcaaggtggacgagcgc
tgcgccacctcgacccgcaatgtctgggcgatcggcgacgtgaccggcgagccgatgctg
gcccatcgcgcgtccgcgcagggcgagatggtcgcggagatcatcgcgggcaagcgccgc
cgcttcgatccggtggcgatccccgccatctgcttcaccgagccggagatcgtgaccgtg
ggcgtcgagcgggcggacgagagccacgtcgtcggacagtttcccttcatggccaatggc
cgcgcgctcagcatggaggcgggcgacggcggcggcttcgtgcgcaccgtcgcggaaaag
ggcagcggacggatcgtggggctgcaggccgtgggccgccatgtctccgagctcgccagc
ggcttcgtggcgctgatcgagatgggcgcgacgctcgaggatgtggcgggcatgatccat
gcgcatcccacgctcggcgaggccgtccatgaaagcgcgctcaaggcgctgggccatgcc
atccatgtctga

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