Sphingobium sp. SYK-6: SLG_09680
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Entry
SLG_09680 CDS
T01622
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00010
Glycolysis / Gluconeogenesis
ssy00020
Citrate cycle (TCA cycle)
ssy00260
Glycine, serine and threonine metabolism
ssy00280
Valine, leucine and isoleucine degradation
ssy00310
Lysine degradation
ssy00380
Tryptophan metabolism
ssy00620
Pyruvate metabolism
ssy00630
Glyoxylate and dicarboxylate metabolism
ssy00640
Propanoate metabolism
ssy00670
One carbon pool by folate
ssy00785
Lipoic acid metabolism
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01120
Microbial metabolism in diverse environments
ssy01200
Carbon metabolism
ssy01210
2-Oxocarboxylic acid metabolism
ssy01240
Biosynthesis of cofactors
Module
ssy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SLG_09680 (lpd)
00020 Citrate cycle (TCA cycle)
SLG_09680 (lpd)
00620 Pyruvate metabolism
SLG_09680 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
SLG_09680 (lpd)
00640 Propanoate metabolism
SLG_09680 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SLG_09680 (lpd)
00280 Valine, leucine and isoleucine degradation
SLG_09680 (lpd)
00310 Lysine degradation
SLG_09680 (lpd)
00380 Tryptophan metabolism
SLG_09680 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SLG_09680 (lpd)
00670 One carbon pool by folate
SLG_09680 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssy04147
]
SLG_09680 (lpd)
Enzymes [BR:
ssy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SLG_09680 (lpd)
Exosome [BR:
ssy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SLG_09680 (lpd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
FAD_oxidored
NAD_binding_8
HI0933_like
FAD_binding_2
Pyr_redox_3
FAD_binding_3
UDPG_MGDP_dh_N
3HCDH_N
DAO
Motif
Other DBs
NCBI-ProteinID:
BAK65643
UniProt:
G2IP04
LinkDB
All DBs
Position
1026316..1027707
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AA seq
463 aa
AA seq
DB search
MSGRTLRPRVLVVGGGPGGYVAAIRAGQLGLETVLVEAGRPGGTCLTRGCIPSKAIIHAA
DLFAETSRAAAQGGHLGIRLAAPPTLDLAATMRWKDGIVDRLSNGVTALLRRAQVTVLKG
WASFADAKSCTVETAEGPVRIEPEHVILATGSLPVELPSLPFGGDVLSSTEALALTELPR
TLAVVGAGYIGLELGIAFAKLGVRVALVEAAERILPLYDELLTRPVLDWLHAHDVELHLQ
ARAGGRSARGLDIETPLGDRFAIPAEKILVTVGRQPNTQGWGLETMAIAMDGRFIKVDER
CATSTRNVWAIGDVTGEPMLAHRASAQGEMVAEIIAGKRRRFDPVAIPAICFTEPEIVTV
GVERADESHVVGQFPFMANGRALSMEAGDGGGFVRTVAEKGSGRIVGLQAVGRHVSELAS
GFVALIEMGATLEDVAGMIHAHPTLGEAVHESALKALGHAIHV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccggacgcttcgcccgcgcgtgcttgtcgtcggcggcgggccgggcggctat
gtcgccgcaatccgcgccgggcaactcggcctggagaccgtactggtcgaggccggccgg
ccgggcggcacttgcctgacgcgcggctgcattccttccaaggcgatcatccacgcggcg
gaccttttcgcggaaacgtcccgcgcggcggcgcagggcggccatctcggcatccgtctc
gccgccccgccgacgctcgatctggccgcgaccatgcggtggaaggacgggatcgtcgac
cggctgagcaatggcgtcacggccctgctgcgacgggcgcaggtgacggtgctgaagggc
tgggccagttttgccgatgccaagagctgcacggtcgagacggcggagggcccggtcagg
atcgagcccgagcatgtcatcctcgccactggctccctgccggtcgaactgccgtcgctg
ccgttcggcggggatgtgctgtcctccaccgaggcgcttgcgctcaccgaattgccgcgc
acgctggcggtggtcggcgcgggctatatcggcctggagctggggatcgccttcgccaag
ctgggcgtgcgcgtggcgctggtcgaggcggccgagcgcattctcccgctctatgacgag
ttgcttacgcgcccggtgctggactggctgcatgcgcatgacgtcgagcttcacctgcag
gcgcgggcaggcggccgatcggcgcgcgggctggatatcgagacgccgctgggggatcgc
ttcgccatccccgccgagaagatcctcgtcaccgtcggccgccagccgaacacgcagggc
tggggcctggagaccatggccatcgcgatggacgggcgcttcatcaaggtggacgagcgc
tgcgccacctcgacccgcaatgtctgggcgatcggcgacgtgaccggcgagccgatgctg
gcccatcgcgcgtccgcgcagggcgagatggtcgcggagatcatcgcgggcaagcgccgc
cgcttcgatccggtggcgatccccgccatctgcttcaccgagccggagatcgtgaccgtg
ggcgtcgagcgggcggacgagagccacgtcgtcggacagtttcccttcatggccaatggc
cgcgcgctcagcatggaggcgggcgacggcggcggcttcgtgcgcaccgtcgcggaaaag
ggcagcggacggatcgtggggctgcaggccgtgggccgccatgtctccgagctcgccagc
ggcttcgtggcgctgatcgagatgggcgcgacgctcgaggatgtggcgggcatgatccat
gcgcatcccacgctcggcgaggccgtccatgaaagcgcgctcaaggcgctgggccatgcc
atccatgtctga
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