KEGG   Sphingobium sp. SYK-6: SLG_10090
Entry
SLG_10090         CDS       T01622                                 
Name
(GenBank) putative bacteriocin processing/transport ATP-binding protein
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    SLG_10090
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssy01002]
    SLG_10090
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ssy02000]
    SLG_10090
   02044 Secretion system [BR:ssy02044]
    SLG_10090
Peptidases and inhibitors [BR:ssy01002]
 Cysteine peptidases
  Family C39
   SLG_10090
Transporters [BR:ssy02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    SLG_10090
Secretion system [BR:ssy02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   SLG_10090
SSDB
Motif
Pfam: Peptidase_C39 ABC_tran ABC_membrane SMC_N AAA_22 AAA_29 DUF87 AAA_18 NTPase_1 Mg_chelatase Cytidylate_kin AAA_28 AAA_10
Other DBs
NCBI-ProteinID: BAK65684
UniProt: G2IP45
LinkDB
Position
complement(1064888..1066981)
AA seq 697 aa
MNIFPANFSGRRRISLIRQTEAAECGLAALAMIANWHGHEIDLNMLRQRFGLSARGMSLR
QLMQTADAMQLLPRPLKLEMAGLHLLNLPAILHWDLNHFVVLERVERERAYIVDPAGTAR
WYEFDEVGRHFSGVALELRPSQDFRAVRAKRPLRFRDLWSGITGLRRALAQTIILSIVMQ
AWVLASPFYLRTAVDEALSSLDSNLLITLAVGFAALALIGAGASLLRKLVLLSSGAALSY
GITSNLARRLFRLPIAWFEKRKVGDILTRFQSILPIQRFLIESAPIALIDGLLSVLTLVM
MMLIAPQLAFVSLLGLLAYSAVRLGLLRAEKQREAEYVKALAREQGAVIETLRGIVTLRL
SGREAMRHAYWQNRLTDALGARYLHERVKAWHETAKTLIPAIELVLVVFLAIRGSMAGAL
SLGTLFAYLAYRQQFVQAGQSLLDEGIKLRLLDLHLDQIADIAQTQEDRGFAEPLVQPAF
EGRIELRNVHFSYGAHDPLVLAGIDLSIAPGDHIAITGPSGGGKSTLAKIILGLVDAVQG
DVLIDGRPLSQYGRRAFRQHVAAVLQDDVLYAGSIADNVASFEEVDMEHLRACLTAASIL
DDIDAMPMRHHTLVGDMGSTLSGGQKQRILLARALYRRPDVLLLDEGTAHLDLDHEAAVN
RAVSALGITRIVIAHRPETIAAADRVVRLVGGKIAEG
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgaacatcttccccgccaatttttccggtcgccggcggatcagcctcattcgccagacc
gaagcggcggaatgcgggctcgccgcgcttgcgatgatcgcgaactggcacgggcacgag
atcgacctcaacatgctgcgccagcgctttggcctcagtgcccggggcatgtcgctgcgc
cagctcatgcagacggcggatgcgatgcaattgctgccgcgcccgctcaagctcgagatg
gcgggcctgcacctgctgaacctacccgcgatcctccactgggatctcaatcacttcgtc
gtgctggagcgcgtggagcgcgagcgggcctatatcgtcgacccggccgggaccgcgcgc
tggtatgaattcgacgaggtggggcgccatttcagcggcgtcgcgctggaattgcgccct
tcgcaggattttcgcgcggtgcgggccaagcggccgctgcggttccgggatctgtggagc
ggcatcaccggcctgcgccgcgcgctggcgcaaacgatcatcctcagcatcgtcatgcag
gcatgggtgctcgcctcgcccttctacctgcgcacggccgtggacgaggcgctctccagc
ctggacagcaacctgcttatcacgctggcggtgggttttgcggcgctggcgctgatcggc
gcgggcgcctcgctgctgcgcaagctcgttctcctctcctccggtgccgccctgtcctac
ggcatcacctccaatctggcgcggcgcctgttccgcctgccgatcgcctggtttgaaaag
cggaaggtgggggacatcctcacccggttccaatccatccttccaattcagcgtttcctc
atcgaaagcgcgccgatcgctctcatcgacggtctgctctcggtattgacgctggtgatg
atgatgctgatcgccccgcagctcgcgtttgtctcgctgctcggtctccttgcctacagc
gccgtccgcctcggcctgttgcgcgcggagaagcagcgcgaggcggaatatgtgaaggcg
ctggcccgcgagcagggcgccgtcatcgagacgctgcgcggcatcgtcacgttgcgcctc
tccggccgcgaagccatgcggcatgcttattggcagaaccgcctcaccgatgcgctgggc
gcgcgctaccttcacgagcgggtcaaggcctggcacgaaaccgcgaaaacgctcatcccc
gcgatcgagctggtgctggtcgtctttctcgccattcggggcagcatggcgggggccctc
agcctgggcacgctcttcgcttatctcgcctatcgccagcagttcgtgcaggccggacaa
tcgctcctggacgaagggatcaagctgcgtctgctcgacctccatctcgatcagatcgcc
gacattgcccagacgcaggaggaccgaggtttcgccgagccgctggtccagcccgcattc
gaaggcaggatcgagctgcgcaacgtgcatttctcctacggcgcgcatgacccgctggtg
ctggcgggcatcgacctgtcgatcgcgccgggggatcatatcgccatcaccgggccctcg
ggtggcggcaagagcacgctcgccaagatcatcctcggccttgtcgacgccgtgcagggc
gacgtgctcatcgatggccgccccctctcccaatatggccgccgcgccttccgccagcat
gtcgcggccgtgctacaggacgacgtgctctacgccgggtcgatcgccgacaatgtcgct
tccttcgaggaggtcgacatggagcatctgcgcgcctgcctgaccgcagcctcgatcctc
gatgacatcgacgcgatgccgatgcgccatcacacgctcgtcggggacatgggctcgacg
ctgtcggggggccagaaacagcgcatcctgctggctcgcgcgctttatcgccggcccgat
gtgctgctcctggatgaaggcaccgcgcatctcgatctggatcatgaggccgccgtcaat
cgcgcggtcagtgcccttgggatcacgcgcatcgtgatcgcgcaccggccggaaacgatc
gccgcggcggatcgggtcgtgcggctggttggcggcaagatcgcggaaggctga

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