Sphingobium sp. SYK-6: SLG_10410
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Entry
SLG_10410 CDS
T01622
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00500
Starch and sucrose metabolism
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
Module
ssy_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SLG_10410 (glgX)
Enzymes [BR:
ssy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
SLG_10410 (glgX)
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GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
BAK65716
UniProt:
G2IP77
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All DBs
Position
complement(1103371..1105482)
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AA seq
703 aa
AA seq
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MTFAFAKPDRLHHELGAEFTGEGTHFAVFSENAEAIELCLFSPDGSEELQRLELPHREGS
ILSGYLPGVRPGQLYGYRAHGAYAPEEGHRFNPNKLLLDPYAREVAGQIRWDDALWGYDL
QSGDDLTFDERDSAPFMVKSVVQDPDFDWEDDKAIRRSWTESVIYEAHVRGLTMVHPDVP
EELRGTYAGMVSDPILDHLRKLGVTAIELLPCQFFLDDRALVDRGLSNYWGYQTLGYFAP
EPRFLQQRDGAPSAIRQFKNMVKRFHRAGIEVIMDVVYNHTAEGSERGPTLCFRGLDNAA
YYALSPENPRYSFDQTGTGNTLSVAHPMVLRMVLDSLRYWVQVMHVDGFRFDLASTLGRQ
AAGFDREGTFFGAIRQDPILAGVKLIAEPWDVGEGGYQVGGFPHPFREWNDKFRDTVRGF
WRGDEGMVGDLAGNLLGSPVQFNHSDRGATSSINFLAAHDGFTLMDTVSFNDRHNEANGE
DGADGHDNNVSDNMGAEGETEDEAIIAARARRRRNMIATLFLSQGVPMLLAGDEIGHSQG
GNNNVYCQDNETAWIDWNRRDDAFLDFVSNMIAFRRDHPVLSQDMFLLGESTEEHRIEIA
WHQPDGREMDEELWGQAGLRVLGLFVDHSARAPFVENENISALFIVLNAGDGLDFTLPTP
NGVTGWVRVVDTARDEAFAPEPCPGDTVAIEPASVCVFAPAQP
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgccttcgcgaagcccgacaggctgcatcatgagctgggggccgaattcacg
ggcgaaggcacacatttcgccgtcttctcggagaatgcggaagccatcgaactctgcctg
ttctccccggacggctcggaagagctccagcggctcgaattgccgcatcgcgagggctcg
atcctgtcgggctatctgcccggcgtccggcccgggcagctttatggctatcgcgcccat
ggtgcttatgcgccggaggaaggtcaccggttcaatcccaacaagctgctgcttgaccct
tatgcccgggaagtcgccgggcagatccgctgggacgatgcgctctggggctatgacctg
caaagcggcgacgatctcactttcgatgaacgcgattcagcacccttcatggtcaagagc
gtcgtgcaggacccggacttcgactgggaggatgacaaggcgatccgccgttcctggacc
gaatccgtcatctatgaagcgcatgtccgggggctcaccatggttcacccggatgtgccc
gaggagttgcgcggcacttatgcgggcatggtcagcgatcccatcctcgaccatctgcgc
aagctcggcgtgaccgcgatcgagctgctgccctgccagttcttcctcgatgatcgcgcg
ctcgtcgaccggggcctgtccaattactggggctatcagacgcttggctatttcgcgccg
gagccccgcttcctccagcagcgcgacggcgcgccctcggcaatccgccagttcaagaac
atggtcaagcgcttccaccgggccggcatcgaggtcatcatggatgtggtctacaaccac
acggccgaggggtccgagcgcggcccgacgctgtgcttccgggggctcgacaacgcggcc
tattatgccctctcccccgagaatccccgttattccttcgaccagacgggcacgggcaac
accctctcggtagcccatcccatggtgctgcgcatggtgctcgattccctgcgctactgg
gtgcaggtgatgcatgtcgacggcttccgcttcgatctcgcgtccaccctggggcgccag
gccgccggcttcgaccgggaaggcacattcttcggcgccatccggcaggatccgatcctg
gccggcgtgaagctgatcgcggagccatgggacgttggcgaaggcggctatcaggtgggc
ggcttccctcatcccttccgggaatggaacgacaagttccgcgacacggtccgcggtttc
tggcggggcgatgaagggatggtgggcgatctggccggcaatctgctcggctcccccgtc
cagttcaatcattccgaccggggcgcgacctcatcgatcaacttcctcgctgcccatgac
ggcttcacgctcatggacaccgtctcgttcaacgatcgccacaacgaggccaatggcgag
gacggggcggacgggcacgacaacaatgtgtcggacaatatgggtgccgaaggtgaaaca
gaggacgaggcgatcatcgctgcgcgcgcccgccggcgccgcaacatgattgcgacgctg
ttcctcagccagggcgttcccatgctgctggccggtgacgagatcggccattcgcagggc
ggcaacaacaatgtctattgccaggacaacgagaccgcctggatcgactggaaccgtcgc
gatgacgccttcctcgacttcgtctccaatatgatcgctttccgccgcgatcaccccgtt
ctctcgcaagacatgttcctgctgggcgaaagcacggaggagcacaggatcgagatcgcc
tggcatcagccggacggccgggagatggacgaggaactgtggggacaggccgggctgcga
gtcctcggtctgttcgtcgaccattccgcccgtgcgcccttcgtcgagaacgagaatatc
agcgcgctcttcatcgtcctcaatgccggcgatgggctcgacttcaccttgcccacgccc
aatggtgtcacgggctgggtccgcgtcgtcgataccgcgcgggacgaagccttcgcgccg
gagccctgccccggggacacggtcgcgatcgagccggccagcgtctgcgtcttcgcgccg
gcccagccatga
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