Sphingobium sp. SYK-6: SLG_10790
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Entry
SLG_10790 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K16092
vitamin B12 transporter
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_10790
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_10790
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BAK65754
LinkDB
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Position
1140178..1142229
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AA seq
683 aa
AA seq
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MLFHNNGACLLAASLSVCSVGVRAEEAGAPAIASDIVVTANRTEERRENVASSMEVVSEE
QLANTVALNFIDQLKKNANVDVIQYPNGLGGVGLRGLRPSFEFSINPQVLVLVDGRPSGS
SSFTTIAPESIARVEVLKGPASALYGASAVGGVINIITRRSSGPLGGQFTVGGGSFQTIR
SGATLGGGLVRGVDFDLDVGYVNQDGDFRLGNGARAGNSSFRRGSGRFRVGSTLSSIARL
DASFDFASLDNDAPGPQSYNPRTPSGNQTDRITGDIRLELTPQDHAIRLIGYASRENYDY
YTVPQLASRYVSSSTLTEYRGAQVQDSWRVLPALRLTYGGDWQRVEASRQSWNANGTGKA
PSSPNESRETKALFAEAGLNLLDEGLILTAGGRYDWITVRTYETPYRINFTPGSANFGVF
NPRGGAVFKLGGGFRLHGTIGRAFVPPQALQLAGESEEFAGIQRRVTYGNADLQPERNTT
WDAGFGFAHGALFADITYFNARTRNRIKTELVSETPTLRQTSYVNADKSRMEGVEAQLAL
DAGAVLGLAQDRVRFNGSVTHIITAQDQTAAGVATAIRNVADWKATGSLTLSNGSTLFGT
ATVRFNGDRVDADNSQGRIFTNGAGGEFTLARFTTVDFSLRWQPTPMDGFRLEIANAFDV
HYYEKADYWMPGRTAYVRYVRKL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgcttttccataataatggcgcgtgcctgctcgccgcgtccttgtccgtttgttccgtc
ggcgtgcgtgcagaggaagcgggcgcccccgcgatcgcgtcggacattgtcgtcacggcc
aatcgtacggaagaacggcgggagaatgtcgcctcgtccatggaagtggtcagcgaggaa
cagcttgccaatacggtcgccctcaatttcatcgatcagctcaagaagaatgcaaacgtc
gacgtcatccaatatcccaacgggctcggcggcgtcggcttgcgaggcttgcggccaagc
ttcgagttctcgatcaatccgcaggtgctggtcctcgtcgacggccgcccgtcaggttcg
agcagcttcaccacgatcgcgccggaaagcatcgcgcgcgtcgaagtcctgaaaggcccg
gcctccgcgctctatggggcgtccgccgtgggtggtgtcatcaacatcatcacgcgccgc
tcgtccgggcctcttggcggccagttcacggttggcggcggatctttccagacgattcgg
tccggcgccacgctcggcggcggcctggtgcgcggcgtcgatttcgaccttgatgtcggc
tacgtcaatcaggatggagacttccggctcggcaatggcgcgcgcgcggggaacagttcc
ttccggcgcggctccggccggttcagggtaggcagcacgctctcgtccattgcccgcctc
gatgcgagtttcgactttgccagtctcgacaatgatgcgcccgggccgcaatcctataat
cccaggacgccttccggcaaccagacggaccggatcacgggcgacattcggctggaactg
acgccgcaggatcacgcgatccgcctcatcggctacgcctctcgggagaactatgattat
tataccgtgccgcaactggcctcgcgctatgtctccagcagcacgctcacggagtatcgc
ggcgctcaggtacaggatagctggcgggtcctgccggcgctccgcctgacttatggcggc
gactggcagagagtcgaggcgagccggcaatcctggaacgccaatggcacggggaaggcg
ccctcgtcgccgaacgaaagccgggagacgaaagccctgttcgcggaagcgggcctgaac
cttctggatgaagggctgatcctgacggctggtggccgctatgactggatcaccgtccgg
acctatgagacgccctatcgcatcaatttcacgccgggatcggccaatttcggcgtcttc
aatccacgcggcggcgccgtgttcaagctgggtggcggtttccgtctccacggcacgatc
ggacgcgcgttcgtgccgccacaggcattgcagctggcgggcgaaagcgaggaattcgcg
ggcatccagcgccgcgtcacatatggaaacgccgatcttcaaccggagcgcaacaccacc
tgggatgccggcttcggttttgcgcatggggcgttgttcgccgacatcacctatttcaac
gcgcgcacccgaaaccggatcaagaccgagctcgtctccgagacgccgacgctccgccag
acaagctatgtcaatgccgacaaatcccggatggaaggcgtggaagcccaactcgcactc
gacgccggggccgttctcgggctggcgcaggaccgggtgcgtttcaacggcagcgtgacg
cacatcatcaccgcacaggaccagacggccgccggggtggcgaccgccatccgcaacgtt
gcggactggaaagcgaccggatcgctcaccctctctaacggcagcacgctgtttggcacc
gctaccgtgcgcttcaatggcgaccgggtcgatgcggacaacagccagggacgcatcttc
accaacggtgcgggcggagagttcacgctcgcccgcttcaccaccgtcgatttcagcctg
cgctggcagccgacccccatggacggcttccggctggaaatcgccaacgccttcgacgtc
cattactacgagaaggccgattactggatgcccggtcgcacggcctatgtccgttacgtg
cggaagctctga
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