Sphingobium sp. SYK-6: SLG_11060
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Entry
SLG_11060 CDS
T01622
Name
(GenBank) putative two-component system hybrid sensor and regulator
Organism
ssy
Sphingobium sp. SYK-6
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
GAF_2
GAF
cREC_REC
PDE8A_N
DUF3450
Syntaxin
GAF_3
RNase_Y_N
ERM_helical
HATPase_c_3
STAS
OVT1
SHE3
HMMR_N
ATG14
CCDC93_CC
FPP
Exonuc_VII_L
Borrelia_P83
FapA
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
BAK65781
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Position
complement(1172656..1175748)
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AA seq
1030 aa
AA seq
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MPLKNREAILYGVLSLLLIAPFLVDLMVPLGTSVWAFYLIPTVLSFLSRKPLAPVVVGSI
VSVLVVTGFFLGRDGVDPSIAFVNRTIGLSVTWLLSGIGIMFIRNKLELERQDWMQVGQV
GLANAISGDLSVEQQAERMLRFLAEYLDAQAAAVFIRDEGGFVRRAVYGVPDTARIPLEI
KPGDGLLGQAVQDRRNFLLTDVPENYLYFGSSFGQAAPRQLLIAGARADDDVIGVIEMGF
AGEEASRAEAFMTRVAGQLGVAIRSATYRSRLQVLLEETQQQAEELQAQGEELQANNEEL
EAQSQRLLESQARLETQQAELEESNASLENQAQELEAQRDELERAQKSLEQQTAELERAS
RYKSEFLANMSHELRTPLNSLLIMARLLAENRKGNLSPEQVKHASTIETSGNDLLNLIND
ILDISKIEAGKIDLDIRPTKISSLFEKLGATFSAAADAKGLKLRISVDPGLSGEIRTDPQ
RAEQVLKNFLSNAIKFTEEGEITLRAAAAEDNRIALSVRDTGIGIPPEKLDVIFEAFRQA
DGTVSRKYGGTGLGLSISRELAALLGGDVRVESAPGEGSIFTLVLPLVLEPSALESRPAS
TATARSLPARVRTGSDQPAPRHSTLEDDRASLTGNSRVILIVEDDAIFAGLLCDLAHEQG
FECLIADTADEGVVLARQYLPHAIILDMNLPDHTGLSVLDRIKRDVRTRHIPVHIVSVSE
DAQAALANGAVGYLLKPVKHEQLVDMLAALETRMAQRVRRVLVVEDDARQAESIGLLLGS
QDVETVAAHSAAECLEKLGELTFDCMVLDLNLPDTSGFDLLERLSEDETIGFPPVIVYTG
RDISAQEELRLRRYSKSIIVKGAKSPERLLDEVTLFLHQVVSELPEEQKEMVFRSLNRDA
ALDGKRILVVEDDIRNVYALTSVFEPHGATIRIARNGQEALDALDQSLRGEAPMVDLVLM
DVMMPEMDGLTATRHIRGQSQWRNLPIIALTAKAMPRDQQDCIAAGANDYLSKPLDVDKL
LSLVRVWMPR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcttaagaatcgtgaagctatcctctacggcgttctttctcttctcctgatcgct
ccgtttctcgtcgacctgatggtgcccctaggtacgtcggtgtgggccttctatctcatc
cccactgtgctttccttcctgtcgcgcaagccgctggcccccgtcgtcgtgggaagcatc
gtcagcgttctcgtggtgaccggcttcttcctcgggcgcgacggggtcgatccctccatc
gccttcgtcaaccgcaccatcgggctttcagtgacctggctgctctccggcatcggcatc
atgttcatccgcaacaagctggaactggagcggcaggactggatgcaggtcggtcaggtc
ggcctcgccaatgcgatttccggtgacctgtcggtcgagcaacaggccgagcgcatgctg
cgtttcctcgccgagtatctggacgcacaggcagccgcggtcttcattcgcgatgaaggg
ggcttcgtgcggcgcgccgtctacggggttcccgacaccgcccggatccccctcgagatc
aagcccggcgatggcctgctcggccaagccgtgcaggacaggcgcaatttcctcctgacc
gacgtccccgagaactacctctatttcggatcgagcttcggccaggcagcgccgcgacag
ctgctgatcgccggcgcacgcgccgatgacgacgtgatcggcgtgatcgagatgggcttt
gccggggaggaagcctcccgggccgaagcgttcatgacccgcgtagcgggccagctgggc
gtcgccatacgctcggccacctatcgcagccgcctgcaggtcctgcttgaggaaacgcag
cagcaggccgaggaactgcaggcgcagggtgaggaattgcaggccaacaacgaggagctg
gaggcacagagccagcgcctgctggaatcgcaggcacggctggaaacacagcaggccgag
ctggaggaaagcaacgcgtcgctcgaaaatcaggcgcaggaactcgaagcgcagcgcgac
gagctggaacgcgcccagaaatcactcgaacagcagacggcggagctggaacgggcgagc
cgttacaagtccgaattcctcgcgaacatgtcccatgagctgcggacgccgctcaactcg
ctgctcatcatggcacggctgctggccgagaaccgcaagggcaatctgagccccgagcag
gtcaagcatgccagcacaatcgaaacctccggcaacgacctcctcaacctcatcaacgat
atcctggacatttcgaagatcgaggcggggaagatcgatctcgatatacggcccacgaag
atctccagcctcttcgagaagctcggcgccacattctccgcggcggcggatgcgaagggc
ctgaagctgaggatcagcgtcgacccgggcctgtccggcgagatcaggacggatccgcaa
cgcgccgaacaggtgctgaagaactttctctccaacgccatcaagttcaccgaggaaggc
gaaatcacgcttcgggcagcagcggcagaggacaaccgaatcgcgctcagcgttcgggac
accggcatcggcattcccccggagaagctggacgtcattttcgaggccttccggcaagcc
gacggcacggtcagccgcaaatatgggggcacgggcctgggcctttccatctcgcgggag
ctggccgctctgctgggcggtgacgtcagggtggaaagcgcgccgggcgaaggcagcatc
ttcaccttggtcctgccgctcgtcctggaaccctccgcgcttgaatcccggcctgccagc
accgcgaccgcacggtcccttccggcacgggttcgcacgggcagcgaccagccggcgccg
cgccactcgacccttgaggatgatcgcgccagccttaccggcaattcacgcgtcatcctg
atcgtcgaggacgacgcgatcttcgcggggctgctgtgcgacctggcgcatgaacagggc
ttcgaatgcctcattgccgacaccgccgatgaaggcgtggtgctggcccggcaatatctg
ccgcacgccatcatcctcgacatgaacctgcccgatcacactgggctttccgtgctggac
cggatcaagcgcgacgtgcgcacgcggcacatccccgtccatatcgtgtcggtgagcgag
gatgcgcaggctgccctcgccaacggggcagtcggctatctcctcaagccggtgaagcac
gagcagctcgtggacatgctggccgcgctggaaacgcgcatggcccagcgcgtgcgccgc
gtcctcgtcgtcgaggacgatgcgcgccaggcggagagcatcgggctgctgctcgggtca
caggatgtcgagacggtggccgcgcacagcgccgccgagtgtctcgagaagctcggcgag
ctgacattcgactgcatggtgctcgatctcaacctgccggacacctccggcttcgatctg
ctcgaacggctgagcgaagacgagacgatcggcttcccgccggtgatcgtctacaccggg
cgtgacatatccgcgcaggaggagttgcggctgcggcgatactccaagtcgatcatcgtc
aagggcgcgaaatcgcccgagcgcctgctcgacgaggtgaccctgttcctccaccaggtc
gtctcggaactgcccgaagagcagaaggagatggtgttccgatcgctcaaccgggatgcc
gcgctggacggcaagagaatccttgtcgtggaagatgacatccgcaacgtctacgcgctc
accagcgtgttcgagccgcacggcgcgaccattcgcatcgcgcgcaacgggcaggaagcg
cttgatgcgctggaccagtccctgcgtggcgaagcgccgatggtcgatctggtcctgatg
gacgtgatgatgccggagatggacggcctcaccgccacgcgccacatccgcggccagagc
cagtggcgcaatcttccgatcatcgcactcaccgcgaaagcgatgccgcgcgatcaacag
gactgcattgcggccggtgccaatgattatctctccaagccgctggacgtcgacaagctc
ctgtccctcgtccgcgtatggatgccgcgatga
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